RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 SRCAPQ6ZRS2 3230 aa15.82■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ABCC4O15439 1325 aa15.81■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CCDC24Q8N4L8 307 aa15.81■□□□□ 0.12
HLA-DQB1-203ENST00000399082 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
HLA-DQB1-203ENST00000399082 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 TRIM27P14373 513 aa15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CAPN15O75808 1086 aa15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 LINS1Q8NG48 757 aa15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 LAMB2P55268 1798 aa15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 COL11A2P13942 1736 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-203ENST00000399082 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ATF7IPQ6VMQ6 1270 aa15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB1-203ENST00000399082 RLBP1P12271 317 aa15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 GCKRQ14397 625 aa15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ERFEQ4G0M1 354 aa15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB1-203ENST00000399082 PLIN1O60240 522 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CASP7P55210 303 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 JARID2Q92833 1246 aaPredicted RBP15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CLUAP1Q96AJ1 413 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
HLA-DQB1-203ENST00000399082 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 RNF123Q5XPI4 1314 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 IPO8O15397 1037 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 ALDH1L1O75891 902 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 PCCAP05165 728 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 SRCIN1Q9C0H9 1055 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 TRMT112Q9UI30 125 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-203ENST00000399082 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 BRCA1P38398 1863 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 H7C1W4 665 aa15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 INTS3Q68E01 1043 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 NLGN2Q8NFZ4 835 aa15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CD2APQ9Y5K6 639 aa15.74■□□□□ 0.11
HLA-DQB1-203ENST00000399082 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 SLC10A5Q5PT55 438 aa15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 COL4A1P02462 1669 aa15.73■□□□□ 0.11
HLA-DQB1-203ENST00000399082 UTYO14607 1347 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 KCNA3P22001 575 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 KCNA4P22459 653 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 ST5P78524 1137 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 PANK1Q8TE04 598 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
HLA-DQB1-203ENST00000399082 GRM8O00222 908 aa15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CHRNA5P30532 468 aa15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 CRY2Q49AN0 593 aa15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
HLA-DQB1-203ENST00000399082 MYH3P11055 1940 aa15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 DPEP1P16444 411 aa15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 KAZALD1Q96I82 304 aa15.7■□□□□ 0.1
HLA-DQB1-203ENST00000399082 A0A0G2JLW4 131 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 NPHP1O15259 732 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 TGFB2P61812 414 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 SUCLG2Q96I99 432 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 MEIS3Q99687 375 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 TAF1P21675 1872 aa15.69■□□□□ 0.1
HLA-DQB1-203ENST00000399082 SRGNP10124 158 aa15.68■□□□□ 0.1
HLA-DQB1-203ENST00000399082 C2CD5Q86YS7 1000 aa15.68■□□□□ 0.1
HLA-DQB1-203ENST00000399082 PLA2G12BQ9BX93 195 aa15.68■□□□□ 0.1
HLA-DQB1-203ENST00000399082 PDE6BP35913 854 aa15.67■□□□□ 0.1
HLA-DQB1-203ENST00000399082 FOXO4P98177 505 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms