RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 CCDC171Q6TFL3 1326 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 NEBLO76041 1014 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 XBP1P17861 261 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 GBP6Q6ZN66 633 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 PARD3Q8TEW0 1356 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
CDH23-203ENST00000398788 TOM1O60784 492 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 CT47B1P0C2W7 299 aaPredicted RBP10.82□□□□□ -0.68
CDH23-203ENST00000398788 SYCP2Q9BX26 1530 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 KIAA0754O94854 1291 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 YY1AP1Q9H869 796 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 DNAI1Q9UI46 699 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 ZNF165P49910 485 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 UBE2HP62256 183 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 PDRG1Q9NUG6 133 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 ACEP12821 1306 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 NF2P35240 595 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 NUCB1Q02818 461 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 PLCD4Q9BRC7 762 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 TSPOAP1O95153 1857 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 FAM135AQ9P2D6 1515 aa10.81□□□□□ -0.68
CDH23-203ENST00000398788 HIP1O00291 1037 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 CDR1P51861 262 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 ANO6Q4KMQ2 910 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 PRPF40BQ6NWY9 871 aaKnown RBP10.8□□□□□ -0.68
CDH23-203ENST00000398788 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 ZCCHC17Q9NP64 241 aaKnown RBP10.8□□□□□ -0.68
CDH23-203ENST00000398788 ZMYM3Q14202 1370 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 RPRD2Q5VT52 1461 aaKnown RBP10.8□□□□□ -0.68
CDH23-203ENST00000398788 CYP2C19P33261 490 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 KRT85P78386 507 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 GUCY1B3Q02153 619 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 BIRC2Q13490 618 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
CDH23-203ENST00000398788 ZHX3Q9H4I2 956 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 NRBP1Q9UHY1 535 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 ARHGEF12Q9NZN5 1544 aa10.8□□□□□ -0.68
CDH23-203ENST00000398788 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
CDH23-203ENST00000398788 MYD88Q99836 296 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 SPTLC3Q9NUV7 552 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 SMC1AQ14683 1233 aaKnown RBP10.79□□□□□ -0.68
CDH23-203ENST00000398788 ZFYVE27Q5T4F4 411 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 CXorf56Q9H5V9 222 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 RAI14Q9P0K7 980 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 MSH6P52701 1360 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 GLI2P10070 1586 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 MBD5Q9P267 1494 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 AMOTQ4VCS5 1084 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 CCDC70Q6NSX1 233 aa10.79□□□□□ -0.68
CDH23-203ENST00000398788 DNMT1P26358 1616 aaKnown RBP10.79□□□□□ -0.68
CDH23-203ENST00000398788 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 DTNBO60941 627 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 SFPQP23246 707 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH23-203ENST00000398788 CHRNA2Q15822 529 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 HSP90AB2PQ58FF8 381 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 ISM2Q6H9L7 571 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 ZBTB3Q9H5J0 574 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
CDH23-203ENST00000398788 ARAP3Q8WWN8 1544 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
CDH23-203ENST00000398788 MAP3K4Q9Y6R4 1608 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 SEC31AO94979 1220 aaKnown RBP10.78□□□□□ -0.68
CDH23-203ENST00000398788 GPTP24298 496 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 DUOX2Q9NRD8 1548 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 EXOC5O00471 708 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 ERLIN1O75477 346 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 ZNF853P0CG23 659 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 GOLGA5Q8TBA6 731 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 SNRKQ9NRH2 765 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 KCNG1Q9UIX4 513 aa10.78□□□□□ -0.68
CDH23-203ENST00000398788 SERPINC1P01008 464 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 GUCY2CP25092 1073 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 HOMEZQ8IX15 550 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 SMARCE1Q969G3 411 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 KIF1BPQ96EK5 621 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 SPATA32Q96LK8 384 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDH23-203ENST00000398788 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 ABCC1P33527 1531 aa10.77□□□□□ -0.68
CDH23-203ENST00000398788 CCDC69A6NI79 296 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 STARD3NLO95772 234 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 METTL24Q5JXM2 366 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 CEP57Q86XR8 500 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 DNAJC25Q9H1X3 360 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 C19orf44Q9H6X5 657 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 SLC24A3Q9HC58 644 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 TRIM22Q8IYM9 498 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 NACAP1Q9BZK3 213 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 SSBP05455 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDH23-203ENST00000398788 EPS15P42566 896 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms