RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
PCDHGB7-201ENST00000398594 PDE1AP54750 535 aa16.77■□□□□ 0.28
PCDHGB7-201ENST00000398594 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
PCDHGB7-201ENST00000398594 CEP57L1Q8IYX8 460 aa16.77■□□□□ 0.28
PCDHGB7-201ENST00000398594 POLD1P28340 1107 aa16.77■□□□□ 0.27
PCDHGB7-201ENST00000398594 IL13P35225 146 aa16.77■□□□□ 0.27
PCDHGB7-201ENST00000398594 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.27
PCDHGB7-201ENST00000398594 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.27
PCDHGB7-201ENST00000398594 SMARCE1Q969G3 411 aa16.77■□□□□ 0.27
PCDHGB7-201ENST00000398594 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 NLRP5P59047 1200 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 TRMT1LQ7Z2T5 733 aaKnown RBP16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZFYVE9O95405 1425 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 SDSP20132 328 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 PAF1Q8N7H5 531 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 A1BGP04217 495 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 MCM4P33991 863 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 TCEANC2Q96MN5 208 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZNHIT6Q9NWK9 470 aaKnown RBP16.76■□□□□ 0.27
PCDHGB7-201ENST00000398594 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 USP21Q9UK80 565 aa16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 RLBP1P12271 317 aa16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 G2E3Q7L622 706 aa16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
PCDHGB7-201ENST00000398594 TNIP1Q15025 636 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 JAG2Q9Y219 1238 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 RIMBP2O15034 1052 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 GSTO1P78417 241 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 CUL5Q93034 780 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 NUCB1Q02818 461 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
PCDHGB7-201ENST00000398594 HCLS1P14317 486 aaPredicted RBP16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 MATR3P43243 847 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 GPS2Q13227 327 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 PICALMQ13492 652 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 ORC3Q9UBD5 711 aaPredicted RBP16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 LRRC2Q9BYS8 371 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 CFAP43Q8NDM7 1665 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 KIF5BP33176 963 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 CCDC39Q9UFE4 941 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 CCDC173Q0VFZ6 552 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 CAMK4Q16566 473 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 BRF1Q92994 677 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
PCDHGB7-201ENST00000398594 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZGPATQ8N5A5 531 aaKnown RBP16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZFYVE16Q7Z3T8 1539 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 TFIP11Q9UBB9 837 aaKnown RBP16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 SCLT1Q96NL6 688 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 DEF6Q9H4E7 631 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
PCDHGB7-201ENST00000398594 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 GRM1Q13255 1194 aa16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 SH3TC1Q8TE82 1336 aa16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 VEZTQ9HBM0 779 aa16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
PCDHGB7-201ENST00000398594 MCM5P33992 734 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 FILIP1Q7Z7B0 1213 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 NOM1Q5C9Z4 860 aaKnown RBP16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 TMEM94Q12767 1356 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 HMG20BQ9P0W2 317 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 TFCP2Q12800 502 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
PCDHGB7-201ENST00000398594 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms