RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 HAND2P61296 217 aa16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 CCDC152Q4G0S7 254 aa16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 MAGI2Q86UL8 1455 aa16.59■□□□□ 0.25
PCDHGA11-201ENST00000398587 TNNT3P45378 269 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA11-201ENST00000398587 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.25
PCDHGA11-201ENST00000398587 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA11-201ENST00000398587 BRF1Q92994 677 aa16.58■□□□□ 0.25
PCDHGA11-201ENST00000398587 ORC3Q9UBD5 711 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA11-201ENST00000398587 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 UBE2HP62256 183 aa16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.24
PCDHGA11-201ENST00000398587 MCM5P33992 734 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 CT47A1Q5JQC4 288 aaPredicted RBP16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 LDHCP07864 332 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 HSP90B2PQ58FF3 399 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 CCDC112Q8NEF3 446 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 CAGE1Q8TC20 777 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 KDM5CP41229 1560 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 PREX2Q70Z35 1606 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 MYOM2P54296 1465 aa16.57■□□□□ 0.24
PCDHGA11-201ENST00000398587 SEC24BO95487 1268 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 CHMLP26374 656 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZHX3Q9H4I2 956 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
PCDHGA11-201ENST00000398587 ERVK-7P63135 1459 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 LTKP29376 864 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 HSPA2P54652 639 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 DDB1Q16531 1140 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 RUFY1Q96T51 708 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 LUC7LQ9NQ29 371 aaKnown RBP16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
PCDHGA11-201ENST00000398587 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 CKAP2LQ8IYA6 745 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 METAP2P50579 478 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 AK7Q96M32 723 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 TCEANC2Q96MN5 208 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 SPTY2D1Q68D10 685 aaPredicted RBP16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
PCDHGA11-201ENST00000398587 TOM1O60784 492 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 ERCC4Q92889 916 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 RAD50Q92878 1312 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 BAG3O95817 575 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
PCDHGA11-201ENST00000398587 KLF18A0A0U1RQI7 1052 aa16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 LGR6Q9HBX8 967 aa16.52■□□□□ 0.24
PCDHGA11-201ENST00000398587 CAVIN2O95810 425 aa16.52■□□□□ 0.23
PCDHGA11-201ENST00000398587 PDE4BQ07343 736 aa16.52■□□□□ 0.23
PCDHGA11-201ENST00000398587 USP25Q9UHP3 1055 aa16.52■□□□□ 0.23
PCDHGA11-201ENST00000398587 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.23
PCDHGA11-201ENST00000398587 TANGO6Q9C0B7 1094 aa16.52■□□□□ 0.23
PCDHGA11-201ENST00000398587 RFC4P35249 363 aa16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 KIF5BP33176 963 aa16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms