RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
TMF1-201ENST00000398559 HYPKQ9NX55 129 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 CAVIN2O95810 425 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 IDEP14735 1019 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 SCLT1Q96NL6 688 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 ZMYND15Q9H091 742 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 ZSCAN16Q9H4T2 348 aaPredicted RBP13.54□□□□□ -0.24
TMF1-201ENST00000398559 ANKRD18BA2A2Z9 1011 aa13.54□□□□□ -0.24
TMF1-201ENST00000398559 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
TMF1-201ENST00000398559 N4BP3O15049 544 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 CLCN1P35523 988 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 MNAT1P51948 309 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 SKILP12757 684 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 SYKP43405 635 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 NUCB1Q02818 461 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 EHBP1Q8NDI1 1231 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMF1-201ENST00000398559 HMG20BQ9P0W2 317 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 PRC1O43663 620 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 CETN1Q12798 172 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 CKAP4Q07065 602 aaKnown RBP13.53□□□□□ -0.24
TMF1-201ENST00000398559 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
TMF1-201ENST00000398559 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
TMF1-201ENST00000398559 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
TMF1-201ENST00000398559 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
TMF1-201ENST00000398559 HSP90AA4PQ58FG1 418 aa13.52□□□□□ -0.24
TMF1-201ENST00000398559 NCOA7Q8NI08 942 aa13.52□□□□□ -0.24
TMF1-201ENST00000398559 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 ARFGAP3Q9NP61 516 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 UBA7P41226 1012 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
TMF1-201ENST00000398559 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
TMF1-201ENST00000398559 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.257e-8■■■□□ 14.9
TMF1-201ENST00000398559 RSPH14Q9UHP6 348 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 TTF1Q15361 905 aaPredicted RBP13.51□□□□□ -0.25
TMF1-201ENST00000398559 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 SDSP20132 328 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 MCM6Q14566 821 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 MFSD6Q6ZSS7 791 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 AFMP43652 599 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
TMF1-201ENST00000398559 ZPR1O75312 459 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 KIF5BP33176 963 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
TMF1-201ENST00000398559 MMRN2Q9H8L6 949 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 EHMT1Q9H9B1 1298 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 AOPEPQ8N6M6 819 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 SYCP3Q8IZU3 236 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.5□□□□□ -0.25
TMF1-201ENST00000398559 AKR1B10O60218 316 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 HSPA4P34932 840 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 GTF2A1P52655 376 aaPredicted RBP13.5□□□□□ -0.25
TMF1-201ENST00000398559 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 KIAA0753Q2KHM9 967 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 C6orf163Q5TEZ5 329 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
TMF1-201ENST00000398559 DRC1Q96MC2 740 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
TMF1-201ENST00000398559 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
TMF1-201ENST00000398559 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
TMF1-201ENST00000398559 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 IVLP07476 585 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMF1-201ENST00000398559 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
TMF1-201ENST00000398559 A0A1W2PRG0 241 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 BRF1Q92994 677 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 TSPY2A6NKD2 308 aa13.49□□□□□ -0.25
TMF1-201ENST00000398559 CYLC1P35663 651 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms