RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 NEFMP07197 916 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 PDIA6Q15084 440 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 EAPPQ56P03 285 aaPredicted RBP15.92■□□□□ 0.14
TFF3-202ENST00000398431 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
TFF3-202ENST00000398431 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 NTSR2O95665 410 aa15.91■□□□□ 0.14
TFF3-202ENST00000398431 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
TFF3-202ENST00000398431 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
TFF3-202ENST00000398431 GPC2Q8N158 579 aa15.91■□□□□ 0.14
TFF3-202ENST00000398431 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
TFF3-202ENST00000398431 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
TFF3-202ENST00000398431 TMEM88BA6NKF7 163 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 VEGFBP49765 207 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 SLC10A5Q5PT55 438 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
TFF3-202ENST00000398431 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
TFF3-202ENST00000398431 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 ERBB4Q15303 1308 aa15.9■□□□□ 0.14
TFF3-202ENST00000398431 FOXN1O15353 648 aa15.89■□□□□ 0.13
TFF3-202ENST00000398431 JDP2Q8WYK2 163 aa15.89■□□□□ 0.13
TFF3-202ENST00000398431 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
TFF3-202ENST00000398431 ANXA1P04083 346 aa15.88■□□□□ 0.13
TFF3-202ENST00000398431 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
TFF3-202ENST00000398431 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
TFF3-202ENST00000398431 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
TFF3-202ENST00000398431 TSPYL4Q9UJ04 414 aa15.88■□□□□ 0.13
TFF3-202ENST00000398431 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
TFF3-202ENST00000398431 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
TFF3-202ENST00000398431 EIF2S2P20042 333 aaKnown RBP15.87■□□□□ 0.13
TFF3-202ENST00000398431 SCNN1DP51172 638 aa15.87■□□□□ 0.13
TFF3-202ENST00000398431 RIPK4P57078 832 aa15.87■□□□□ 0.13
TFF3-202ENST00000398431 GRIPAP1Q4V328 841 aa15.87■□□□□ 0.13
TFF3-202ENST00000398431 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
TFF3-202ENST00000398431 PPEF1O14829 653 aaPredicted RBP15.86■□□□□ 0.13
TFF3-202ENST00000398431 EPS15P42566 896 aa15.86■□□□□ 0.13
TFF3-202ENST00000398431 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
TFF3-202ENST00000398431 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
TFF3-202ENST00000398431 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
TFF3-202ENST00000398431 PPP1R42Q7Z4L9 355 aa15.86■□□□□ 0.13
TFF3-202ENST00000398431 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
TFF3-202ENST00000398431 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
TFF3-202ENST00000398431 RASSF10A6NK89 507 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
TFF3-202ENST00000398431 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 LARGE2Q8N3Y3 721 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
TFF3-202ENST00000398431 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 WBP1LQ9NX94 342 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
TFF3-202ENST00000398431 COPS6Q7L5N1 327 aa15.84■□□□□ 0.13
TFF3-202ENST00000398431 PRDM10Q9NQV6 1147 aa15.84■□□□□ 0.13
TFF3-202ENST00000398431 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
TFF3-202ENST00000398431 AOC3Q16853 763 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 KRT24Q2M2I5 525 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 NECTIN2Q92692 538 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 RTFDC1Q9BY42 306 aaPredicted RBP15.82■□□□□ 0.12
TFF3-202ENST00000398431 VPS33BQ9H267 617 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 ABCC4O15439 1325 aa15.82■□□□□ 0.12
TFF3-202ENST00000398431 CHL1O00533 1208 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 PPIP5K2O43314 1243 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 BBOX1O75936 387 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
TFF3-202ENST00000398431 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
TFF3-202ENST00000398431 CTCFP49711 727 aaPredicted RBP15.81■□□□□ 0.12
TFF3-202ENST00000398431 CXCL9Q07325 125 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 TCIRG1Q13488 830 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 RALBP1Q15311 655 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 CST9Q5W186 159 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 USP50Q70EL3 339 aaPredicted RBP15.81■□□□□ 0.12
TFF3-202ENST00000398431 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 NIM1KQ8IY84 436 aa15.81■□□□□ 0.12
TFF3-202ENST00000398431 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
TFF3-202ENST00000398431 AIMP1Q12904 312 aaKnown RBP15.8■□□□□ 0.12
TFF3-202ENST00000398431 TRAF5O00463 557 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 LBX1P52954 281 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 GPRC5DQ9NZD1 345 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 ZNRF3Q9ULT6 936 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 LAMB2P55268 1798 aa15.79■□□□□ 0.12
TFF3-202ENST00000398431 TAF1P21675 1872 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 ANKRD36CQ5JPF3 1778 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 HSP90AB3PQ58FF7 597 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 AIDAQ96BJ3 306 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
TFF3-202ENST00000398431 ABT1Q9ULW3 272 aaKnown RBP15.78■□□□□ 0.12
TFF3-202ENST00000398431 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
TFF3-202ENST00000398431 LMOD3Q0VAK6 560 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 KIAA2012Q0VF49 1180 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 MPNDQ8N594 471 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
TFF3-202ENST00000398431 ADARB2Q9NS39 739 aaKnown RBP15.77■□□□□ 0.12
TFF3-202ENST00000398431 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms