RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 CCDC114Q96M63 670 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ACTN2P35609 894 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 MIPOL1Q8TD10 442 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ASXL1Q8IXJ9 1541 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 SSFA2P28290 1259 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
VGLL3-202ENST00000398399 ARHGAP25P42331 645 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
VGLL3-202ENST00000398399 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
VGLL3-202ENST00000398399 STRN4Q9NRL3 753 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 MACROD2A1Z1Q3 448 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 NAA25Q14CX7 972 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
VGLL3-202ENST00000398399 NSD2O96028 1365 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 KRT86O43790 486 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 UBASH3AP57075 661 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 TMEM57Q8N5G2 664 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 SLC12A7Q9Y666 1083 aa15.71■□□□□ 0.11
VGLL3-202ENST00000398399 SPAG1Q07617 926 aa15.71■□□□□ 0.1
VGLL3-202ENST00000398399 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.1
VGLL3-202ENST00000398399 GOLGA8BA8MQT2 603 aa15.7■□□□□ 0.1
VGLL3-202ENST00000398399 TSNAXIP1Q2TAA8 658 aa15.7■□□□□ 0.1
VGLL3-202ENST00000398399 LUC7L2Q9Y383 392 aaKnown RBP15.7■□□□□ 0.1
VGLL3-202ENST00000398399 MTIF2P46199 727 aaKnown RBP15.7■□□□□ 0.1
VGLL3-202ENST00000398399 MAP3K9P80192 1104 aa15.7■□□□□ 0.1
VGLL3-202ENST00000398399 MXRA7P84157 204 aa15.7■□□□□ 0.1
VGLL3-202ENST00000398399 SSRP1Q08945 709 aaKnown RBP15.7■□□□□ 0.1
VGLL3-202ENST00000398399 SIL1Q9H173 461 aa15.7■□□□□ 0.1
VGLL3-202ENST00000398399 PAIP2Q9BPZ3 127 aaKnown RBP15.7■□□□□ 0.1
VGLL3-202ENST00000398399 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
VGLL3-202ENST00000398399 ATP2B2Q01814 1243 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 CALML4Q96GE6 196 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 ALDH3A1P30838 453 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 VAV2P52735 878 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 CACNA2D3Q8IZS8 1091 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 STMN2Q93045 179 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 KRT83P78385 493 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 LMNTD2Q8IXW0 634 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 TCP11L1Q9NUJ3 509 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
VGLL3-202ENST00000398399 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 ATRIPQ8WXE1 791 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 LRRC45Q96CN5 670 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 CCDC97Q96F63 343 aaPredicted RBP15.69■□□□□ 0.1
VGLL3-202ENST00000398399 EHMT1Q9H9B1 1298 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 CABP2Q9NPB3 220 aa15.69■□□□□ 0.1
VGLL3-202ENST00000398399 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 VCX3BQ9H321 246 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 CPLX4Q7Z7G2 160 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 VPS18Q9P253 973 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
VGLL3-202ENST00000398399 SYT1P21579 422 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 ZBTB16Q05516 673 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 NCOA1Q15788 1441 aa15.68■□□□□ 0.1
VGLL3-202ENST00000398399 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
VGLL3-202ENST00000398399 RNF168Q8IYW5 571 aaPredicted RBP15.68■□□□□ 0.1
VGLL3-202ENST00000398399 PRPF4BQ13523 1007 aaKnown RBP15.67■□□□□ 0.1
VGLL3-202ENST00000398399 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
VGLL3-202ENST00000398399 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
VGLL3-202ENST00000398399 HMGB2P26583 209 aaKnown RBP15.67■□□□□ 0.1
VGLL3-202ENST00000398399 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 CATIPQ7Z7H3 387 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 ANKRD12Q6UB98 2062 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 GJB2P29033 226 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 CWC25Q9NXE8 425 aaPredicted RBP15.67■□□□□ 0.1
VGLL3-202ENST00000398399 USP37Q86T82 979 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 EXOC1Q9NV70 894 aa15.67■□□□□ 0.1
VGLL3-202ENST00000398399 SNX21Q969T3 373 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 TRIM7Q9C029 511 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
VGLL3-202ENST00000398399 ATP2A2P16615 1042 aaKnown RBP15.66■□□□□ 0.1
VGLL3-202ENST00000398399 CIB2O75838 187 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 SYKP43405 635 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 AFAP1L1Q8TED9 768 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 IQCA1Q86XH1 822 aa15.66■□□□□ 0.1
VGLL3-202ENST00000398399 NAPBQ9H115 298 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 CCDC194A0A1B0GVG4 234 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 NLRP2Q9NX02 1062 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 CACNA1FO60840 1977 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 BUB1BO60566 1050 aaPredicted RBP15.65■□□□□ 0.1
VGLL3-202ENST00000398399 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 RAB3IL1Q8TBN0 382 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
VGLL3-202ENST00000398399 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
VGLL3-202ENST00000398399 NFE2L2Q16236 605 aa15.64■□□□□ 0.1
VGLL3-202ENST00000398399 MAP7D1Q3KQU3 841 aa15.64■□□□□ 0.1
VGLL3-202ENST00000398399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.64■□□□□ 0.1
VGLL3-202ENST00000398399 N4BP3O15049 544 aa15.64■□□□□ 0.09
VGLL3-202ENST00000398399 DNA2P51530 1060 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms