RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 NOB1Q9ULX3 412 aaKnown RBP32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 ABCC12Q96J65 1359 aa32.3■■■□□ 2.76
TMEM55B-202ENST00000398020 A0A0G2JLW4 131 aa32.3■■■□□ 2.76
TMEM55B-202ENST00000398020 WWC3Q9ULE0 1092 aa32.3■■■□□ 2.76
TMEM55B-202ENST00000398020 PTPRCP08575 1304 aa32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 KIAA1551Q9HCM1 1747 aa32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 PXDNLA1KZ92 1463 aa32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 IBTKQ9P2D0 1353 aaPredicted RBP32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 TRIM28Q13263 835 aaKnown RBP32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 RTL5Q5HYW3 569 aaPredicted RBP32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 SYNE4Q8N205 404 aa32.29■■■□□ 2.76
TMEM55B-202ENST00000398020 CHRNA5P30532 468 aa32.28■■■□□ 2.76
TMEM55B-202ENST00000398020 SLC4A10Q6U841 1118 aa32.28■■■□□ 2.76
TMEM55B-202ENST00000398020 BRIP1Q9BX63 1249 aa32.28■■■□□ 2.76
TMEM55B-202ENST00000398020 DPEP1P16444 411 aa32.27■■■□□ 2.76
TMEM55B-202ENST00000398020 TGFB2P61812 414 aa32.27■■■□□ 2.76
TMEM55B-202ENST00000398020 CCDC191Q8NCU4 936 aa32.27■■■□□ 2.76
TMEM55B-202ENST00000398020 FAM89AQ96GI7 184 aa32.27■■■□□ 2.76
TMEM55B-202ENST00000398020 BRPF1P55201 1214 aaPredicted RBP32.26■■■□□ 2.75
TMEM55B-202ENST00000398020 CWC25Q9NXE8 425 aaPredicted RBP32.26■■■□□ 2.75
TMEM55B-202ENST00000398020 NEURL1BA8MQ27 555 aa32.25■■■□□ 2.75
TMEM55B-202ENST00000398020 TNRC6CQ9HCJ0 1690 aaKnown RBP32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 JARID2Q92833 1246 aaPredicted RBP32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 FRAT1Q92837 279 aaPredicted RBP32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 SH3TC1Q8TE82 1336 aa32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 PDE6BP35913 854 aa32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 BEND3Q5T5X7 828 aa32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 LINS1Q8NG48 757 aa32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 KIF16BQ96L93 1317 aa32.24■■■□□ 2.75
TMEM55B-202ENST00000398020 C2CD5Q86YS7 1000 aa32.23■■■□□ 2.75
TMEM55B-202ENST00000398020 UTRNP46939 3433 aa32.22■■■□□ 2.75
TMEM55B-202ENST00000398020 HCLS1P14317 486 aaPredicted RBP32.22■■■□□ 2.75
TMEM55B-202ENST00000398020 COL11A2P13942 1736 aaPredicted RBP32.22■■■□□ 2.75
TMEM55B-202ENST00000398020 RNF123Q5XPI4 1314 aa32.21■■■□□ 2.75
TMEM55B-202ENST00000398020 KCNA3P22001 575 aa32.21■■■□□ 2.75
TMEM55B-202ENST00000398020 ZBTB38Q8NAP3 1195 aaPredicted RBP32.21■■■□□ 2.75
TMEM55B-202ENST00000398020 H0YIN7 160 aa32.2■■■□□ 2.74
TMEM55B-202ENST00000398020 C3orf67Q6ZVT6 689 aa32.2■■■□□ 2.74
TMEM55B-202ENST00000398020 PELP1Q8IZL8 1130 aaKnown RBP32.2■■■□□ 2.74
TMEM55B-202ENST00000398020 GCKRQ14397 625 aa32.19■■■□□ 2.74
TMEM55B-202ENST00000398020 SLC10A5Q5PT55 438 aa32.18■■■□□ 2.74
TMEM55B-202ENST00000398020 SRCIN1Q9C0H9 1055 aa32.18■■■□□ 2.74
TMEM55B-202ENST00000398020 RCAN3Q9UKA8 241 aa32.18■■■□□ 2.74
TMEM55B-202ENST00000398020 PCCAP05165 728 aaPredicted RBP32.17■■■□□ 2.74
TMEM55B-202ENST00000398020 API5Q9BZZ5 524 aaKnown RBP32.17■■■□□ 2.74
TMEM55B-202ENST00000398020 TNNQ9UQP3 1299 aa32.17■■■□□ 2.74
TMEM55B-202ENST00000398020 DDX60Q8IY21 1712 aaKnown RBP32.17■■■□□ 2.74
TMEM55B-202ENST00000398020 SRGNP10124 158 aa32.16■■■□□ 2.74
TMEM55B-202ENST00000398020 ZNF622Q969S3 477 aaKnown RBP eCLIP32.16■■■□□ 2.74
TMEM55B-202ENST00000398020 DLEC1Q9Y238 1755 aa32.16■■■□□ 2.74
TMEM55B-202ENST00000398020 RIC1Q4ADV7 1423 aa32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 KLRG2A4D1S0 409 aaPredicted RBP32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 IRS4O14654 1257 aaPredicted RBP32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 UBE3BQ7Z3V4 1068 aa32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 BRCA1P38398 1863 aaKnown RBP32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 ARHGAP45Q92619 1136 aa32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 NLRP3Q96P20 1036 aa32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 PIM2Q9P1W9 311 aa32.15■■■□□ 2.74
TMEM55B-202ENST00000398020 IPO8O15397 1037 aaKnown RBP32.14■■■□□ 2.74
TMEM55B-202ENST00000398020 TRIM27P14373 513 aa32.14■■■□□ 2.74
TMEM55B-202ENST00000398020 ATF7IPQ6VMQ6 1270 aa32.13■■■□□ 2.73
TMEM55B-202ENST00000398020 LAMB2P55268 1798 aa32.13■■■□□ 2.73
TMEM55B-202ENST00000398020 ALDH1L1O75891 902 aa32.12■■■□□ 2.73
TMEM55B-202ENST00000398020 CRY2Q49AN0 593 aa32.12■■■□□ 2.73
TMEM55B-202ENST00000398020 CLUAP1Q96AJ1 413 aa32.12■■■□□ 2.73
TMEM55B-202ENST00000398020 PDZRN3Q9UPQ7 1066 aa32.12■■■□□ 2.73
TMEM55B-202ENST00000398020 H7C1W4 665 aa32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 GPR162Q16538 588 aa32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 ZKSCAN2Q63HK3 967 aa32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 BCS1LQ9Y276 419 aa32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 YBX3P16989 372 aaKnown RBP eCLIP32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 MASTLQ96GX5 879 aa32.11■■■□□ 2.73
TMEM55B-202ENST00000398020 NPR1P16066 1061 aa32.09■■■□□ 2.73
TMEM55B-202ENST00000398020 RPGRQ92834 1020 aaKnown RBP32.09■■■□□ 2.73
TMEM55B-202ENST00000398020 C9orf78Q9NZ63 289 aaPredicted RBP32.09■■■□□ 2.73
TMEM55B-202ENST00000398020 CDHR2Q9BYE9 1310 aa32.09■■■□□ 2.73
TMEM55B-202ENST00000398020 DALRD3Q5D0E6 543 aaKnown RBP32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 STYK1Q6J9G0 422 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 ABCC4O15439 1325 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 CACNA1SQ13698 1873 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 GRM8O00222 908 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 CASP7P55210 303 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 TTLL6Q8N841 843 aa32.08■■■□□ 2.73
TMEM55B-202ENST00000398020 CCT4P50991 539 aaKnown RBP32.06■■■□□ 2.72
TMEM55B-202ENST00000398020 PDE8AO60658 829 aa32.05■■■□□ 2.72
TMEM55B-202ENST00000398020 CCDC85AQ96PX6 553 aaPredicted RBP32.05■■■□□ 2.72
TMEM55B-202ENST00000398020 NBPF7P0C2Y1 421 aaPredicted RBP32.05■■■□□ 2.72
TMEM55B-202ENST00000398020 PLIN1O60240 522 aa32.04■■■□□ 2.72
TMEM55B-202ENST00000398020 CNKSR1Q969H4 720 aa32.04■■■□□ 2.72
TMEM55B-202ENST00000398020 ZNF219Q9P2Y4 722 aaPredicted RBP32.04■■■□□ 2.72
TMEM55B-202ENST00000398020 HSP90B1P14625 803 aaKnown RBP32.03■■■□□ 2.72
TMEM55B-202ENST00000398020 PRPF40BQ6NWY9 871 aaKnown RBP32.03■■■□□ 2.72
TMEM55B-202ENST00000398020 SLX4Q8IY92 1834 aa32.03■■■□□ 2.72
TMEM55B-202ENST00000398020 HOXA10P31260 410 aaPredicted RBP32.02■■■□□ 2.72
TMEM55B-202ENST00000398020 SF3B3Q15393 1217 aaKnown RBP32.02■■■□□ 2.72
TMEM55B-202ENST00000398020 RBM17Q96I25 401 aaKnown RBP32.02■■■□□ 2.72
TMEM55B-202ENST00000398020 DCAF8L1A6NGE4 600 aa32.02■■■□□ 2.72
TMEM55B-202ENST00000398020 USP44Q9H0E7 712 aa32.02■■■□□ 2.72
TMEM55B-202ENST00000398020 TAF1P21675 1872 aa32.01■■■□□ 2.71
TMEM55B-202ENST00000398020 INTS3Q68E01 1043 aaKnown RBP32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms