RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SNRPBP14678 240 aaKnown RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 PCSK2P16519 638 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 SMPD1P17405 629 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 USP5P45974 858 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 GJA8P48165 433 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 GDF10P55107 478 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 PLEKHG6Q3KR16 790 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 ERFEQ4G0M1 354 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 MSS51Q4VC12 460 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 TBCELQ5QJ74 424 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 NBPF6Q5VWK0 638 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 BPHLQ86WA6 291 aaPredicted RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCAR1Q8IX12 1150 aaKnown RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 EDEM1Q92611 657 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 NGLY1Q96IV0 654 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 NBPF4Q96M43 638 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 PRDM16Q9HAZ2 1276 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 DDX56Q9NY93 547 aaKnown RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 MAGEC2Q9UBF1 373 aaPredicted RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 GABBR1Q9UBS5 961 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 STK17AQ9UEE5 414 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 FAN1Q9Y2M0 1017 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 CHMP3Q9Y3E7 222 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 R3HCC1Q9Y3T6 440 aaKnown RBP2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 A0A1W2PRU2 124 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCDC85CA6NKD9 419 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 TMEM229AB2RXF0 380 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 J3QL48 77 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 EIF1AYO14602 144 aaKnown RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZBTB39O15060 712 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 CDC45O75419 566 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 STAU1O95793 577 aaKnown RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 PDGFAP04085 211 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 NEFLP07196 543 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 PTPN12Q05209 780 aaKnown RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 ORC1Q13415 861 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 TAF1CQ15572 869 aaPredicted RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 LINC01559Q495D7 138 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 C8orf34Q49A92 452 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 SH3RF1Q7Z6J0 888 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 SLC9A9Q8IVB4 645 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 FMNL3Q8IVF7 1028 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCDC146Q8IYE0 955 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 SEPT12Q8IYM1 358 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 GJD3Q8N144 294 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 PRPF38AQ8NAV1 312 aaKnown RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 JDP2Q8WYK2 163 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 BAP1Q92560 729 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 MKL1Q969V6 931 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 RNPC3Q96LT9 517 aaKnown RBP2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 CFHR5Q9BXR6 569 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 IRF2BPLQ9H1B7 796 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZNF408Q9H9D4 720 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 ATP13A2Q9NQ11 1180 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 SIRPGQ9P1W8 387 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 PRKAB1Q9Y478 270 aa2.86□□□□□ -1.95
HMGN2P39-201ENST00000398005 TTC24A2A3L6 582 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 WNT7AO00755 349 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 TERTO14746 1132 aaKnown RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 OPLAHO14841 1288 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZAP70P43403 619 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SCTRP47872 440 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 NASPP49321 788 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SCNN1DP51172 638 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 MMP16P51512 607 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 INSM1Q01101 510 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SERINC3Q13530 473 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 TAF7LQ5H9L4 462 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 MEI1Q5TIA1 1274 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 PTCRAQ6ISU1 281 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 ANKS3Q6ZW76 656 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 RPUSD2Q8IZ73 545 aaKnown RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SNIP1Q8TAD8 396 aaKnown RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SH3TC2Q8TF17 1288 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 CPLX3Q8WVH0 158 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 APPBP2Q92624 585 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 HPS1Q92902 700 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 FOXJ1Q92949 421 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 MRGPRX2Q96LB1 330 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 TRIM47Q96LD4 638 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 DEPDC7Q96QD5 511 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 KCTD15Q96SI1 283 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 CEP89Q96ST8 783 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 SPON2Q9BUD6 331 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 C2orf49Q9BVC5 232 aaPredicted RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 C12orf49Q9H741 205 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 QTRT2Q9H974 415 aaKnown RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 FANCLQ9NW38 375 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 BCCIPQ9P287 314 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 CDV3Q9UKY7 258 aaKnown RBP2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 LRFN2Q9ULH4 789 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 MRVI1Q9Y6F6 885 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 USP31Q70CQ4 1352 aa2.85□□□□□ -1.95
HMGN2P39-201ENST00000398005 CPNE3O75131 537 aaKnown RBP2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 INHAP05111 366 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 PDGFRBP09619 1106 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 USP17L7P0C7H9 530 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 ETFBP38117 255 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms