RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 KIF6Q6ZMV9 814 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 IBTKQ9P2D0 1353 aaPredicted RBP15.77■□□□□ 0.12
SYNE4-203ENST00000397428 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 UBN2Q6ZU65 1347 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.12
SYNE4-203ENST00000397428 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 CNTROBQ8N137 903 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
SYNE4-203ENST00000397428 GPTP24298 496 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 VEGFBP49765 207 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 PDIA6Q15084 440 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
SYNE4-203ENST00000397428 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
SYNE4-203ENST00000397428 ZBTB3Q9H5J0 574 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 ADAMTSL1Q8N6G6 1762 aa15.76■□□□□ 0.11
SYNE4-203ENST00000397428 CAPN15O75808 1086 aa15.75■□□□□ 0.11
SYNE4-203ENST00000397428 NTSR2O95665 410 aa15.75■□□□□ 0.11
SYNE4-203ENST00000397428 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
SYNE4-203ENST00000397428 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
SYNE4-203ENST00000397428 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
SYNE4-203ENST00000397428 FOXN1O15353 648 aa15.74■□□□□ 0.11
SYNE4-203ENST00000397428 MAP1SQ66K74 1059 aaPredicted RBP15.74■□□□□ 0.11
SYNE4-203ENST00000397428 C3orf67Q6ZVT6 689 aa15.74■□□□□ 0.11
SYNE4-203ENST00000397428 PPP1R42Q7Z4L9 355 aa15.74■□□□□ 0.11
SYNE4-203ENST00000397428 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
SYNE4-203ENST00000397428 COL4A5P29400 1685 aa15.73■□□□□ 0.11
SYNE4-203ENST00000397428 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
SYNE4-203ENST00000397428 DEFB115Q30KQ5 88 aa15.73■□□□□ 0.11
SYNE4-203ENST00000397428 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
SYNE4-203ENST00000397428 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
SYNE4-203ENST00000397428 PRDM10Q9NQV6 1147 aa15.73■□□□□ 0.11
SYNE4-203ENST00000397428 RASSF10A6NK89 507 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 RIPK4P57078 832 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 WBP1LQ9NX94 342 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 GJA3Q9Y6H8 435 aa15.72■□□□□ 0.11
SYNE4-203ENST00000397428 MAPK8IP3Q9UPT6 1336 aa15.71■□□□□ 0.11
SYNE4-203ENST00000397428 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
SYNE4-203ENST00000397428 EPS15P42566 896 aa15.71■□□□□ 0.11
SYNE4-203ENST00000397428 SCNN1DP51172 638 aa15.71■□□□□ 0.11
SYNE4-203ENST00000397428 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
SYNE4-203ENST00000397428 UTP14AQ9BVJ6 771 aaKnown RBP15.71■□□□□ 0.11
SYNE4-203ENST00000397428 BBOX1O75936 387 aa15.7■□□□□ 0.1
SYNE4-203ENST00000397428 EIF2S2P20042 333 aaKnown RBP15.7■□□□□ 0.1
SYNE4-203ENST00000397428 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
SYNE4-203ENST00000397428 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
SYNE4-203ENST00000397428 SLC51AQ86UW1 340 aa15.7■□□□□ 0.1
SYNE4-203ENST00000397428 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
SYNE4-203ENST00000397428 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
SYNE4-203ENST00000397428 CTCFP49711 727 aaPredicted RBP15.69■□□□□ 0.1
SYNE4-203ENST00000397428 USP50Q70EL3 339 aaPredicted RBP15.69■□□□□ 0.1
SYNE4-203ENST00000397428 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
SYNE4-203ENST00000397428 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
SYNE4-203ENST00000397428 DDX21Q9NR30 783 aaKnown RBP eCLIP15.69■□□□□ 0.1
SYNE4-203ENST00000397428 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
SYNE4-203ENST00000397428 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
SYNE4-203ENST00000397428 TCIRG1Q13488 830 aa15.68■□□□□ 0.1
SYNE4-203ENST00000397428 RALBP1Q15311 655 aa15.68■□□□□ 0.1
SYNE4-203ENST00000397428 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
SYNE4-203ENST00000397428 CHL1O00533 1208 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 ANXA1P04083 346 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 CXCL9Q07325 125 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 CST9Q5W186 159 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 NIM1KQ8IY84 436 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 AIDAQ96BJ3 306 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
SYNE4-203ENST00000397428 ZNRF3Q9ULT6 936 aa15.67■□□□□ 0.1
SYNE4-203ENST00000397428 PPIP5K2O43314 1243 aa15.66■□□□□ 0.1
SYNE4-203ENST00000397428 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
SYNE4-203ENST00000397428 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
SYNE4-203ENST00000397428 GPRC5DQ9NZD1 345 aa15.66■□□□□ 0.1
SYNE4-203ENST00000397428 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
SYNE4-203ENST00000397428 ABCC4O15439 1325 aa15.66■□□□□ 0.1
SYNE4-203ENST00000397428 LBX1P52954 281 aa15.65■□□□□ 0.1
SYNE4-203ENST00000397428 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
SYNE4-203ENST00000397428 LMOD3Q0VAK6 560 aa15.65■□□□□ 0.1
SYNE4-203ENST00000397428 AOC3Q16853 763 aa15.65■□□□□ 0.1
SYNE4-203ENST00000397428 XAGE3Q8WTP9 111 aa15.65■□□□□ 0.1
SYNE4-203ENST00000397428 ADARB2Q9NS39 739 aaKnown RBP15.65■□□□□ 0.1
SYNE4-203ENST00000397428 HCLS1P14317 486 aaPredicted RBP15.64■□□□□ 0.09
SYNE4-203ENST00000397428 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
SYNE4-203ENST00000397428 MPNDQ8N594 471 aa15.64■□□□□ 0.09
SYNE4-203ENST00000397428 ABT1Q9ULW3 272 aaKnown RBP15.64■□□□□ 0.09
SYNE4-203ENST00000397428 ANKRD36CQ5JPF3 1778 aa15.63■□□□□ 0.09
SYNE4-203ENST00000397428 TRAF5O00463 557 aa15.63■□□□□ 0.09
SYNE4-203ENST00000397428 HSPA8P11142 646 aaKnown RBP15.63■□□□□ 0.09
SYNE4-203ENST00000397428 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
SYNE4-203ENST00000397428 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
SYNE4-203ENST00000397428 NECTIN2Q92692 538 aa15.63■□□□□ 0.09
SYNE4-203ENST00000397428 TRMT112Q9UI30 125 aaKnown RBP15.63■□□□□ 0.09
SYNE4-203ENST00000397428 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
SYNE4-203ENST00000397428 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
SYNE4-203ENST00000397428 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
SYNE4-203ENST00000397428 CAPNS2Q96L46 248 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms