RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 CCDC30Q5VVM6 783 aa14.34□□□□□ -0.11
NDUFA9-202ENST00000396655 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
NDUFA9-202ENST00000396655 NECTIN2Q92692 538 aa14.34□□□□□ -0.11
NDUFA9-202ENST00000396655 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
NDUFA9-202ENST00000396655 NTSR2O95665 410 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 GPTP24298 496 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 HOXA10P31260 410 aaPredicted RBP14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 AIMP1Q12904 312 aaKnown RBP14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 SUSD4Q5VX71 490 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 UTP14AQ9BVJ6 771 aaKnown RBP14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 LTBP3Q9NS15 1303 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 SBF1O95248 1867 aa14.33□□□□□ -0.12
NDUFA9-202ENST00000396655 LMNB1P20700 586 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 ERFEQ4G0M1 354 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
NDUFA9-202ENST00000396655 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
NDUFA9-202ENST00000396655 ELL2O00472 640 aaPredicted RBP14.31□□□□□ -0.12
NDUFA9-202ENST00000396655 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
NDUFA9-202ENST00000396655 ANKRD36CQ5JPF3 1778 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 CCER2I3L3R5 266 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 NFKBIEO00221 500 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 C21orf2O43822 256 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
NDUFA9-202ENST00000396655 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 CAPN15O75808 1086 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 ABCC12Q96J65 1359 aa14.29□□□□□ -0.12
NDUFA9-202ENST00000396655 KIF3CO14782 793 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 DNAJC5GQ8N7S2 189 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 TSPYL6Q8N831 410 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 RPGRQ92834 1020 aaKnown RBP14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 STK31Q9BXU1 1019 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
NDUFA9-202ENST00000396655 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
NDUFA9-202ENST00000396655 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
NDUFA9-202ENST00000396655 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.13
NDUFA9-202ENST00000396655 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
NDUFA9-202ENST00000396655 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.13
NDUFA9-202ENST00000396655 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
NDUFA9-202ENST00000396655 TAOK3Q9H2K8 898 aa14.27□□□□□ -0.13
NDUFA9-202ENST00000396655 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
NDUFA9-202ENST00000396655 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
NDUFA9-202ENST00000396655 ZNF521Q96K83 1311 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 VAMP4O75379 141 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 BBOX1O75936 387 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 APLP1P51693 650 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 PRELPP51888 382 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 RASSF7Q02833 373 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 COL13A1Q5TAT6 717 aaPredicted RBP14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 DICER1Q9UPY3 1922 aaKnown RBP14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 CCDC88AQ3V6T2 1871 aa14.25□□□□□ -0.13
NDUFA9-202ENST00000396655 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 FKBP4Q02790 459 aaKnown RBP eCLIP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 DPY19L2Q6NUT2 758 aa14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 PSMD1Q99460 953 aa14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 METTL22Q9BUU2 404 aaPredicted RBP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
NDUFA9-202ENST00000396655 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 GLTPD2A6NH11 291 aa14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 SF3B3Q15393 1217 aaKnown RBP14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 TMX4Q9H1E5 349 aaPredicted RBP14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 VPS33BQ9H267 617 aa14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 WDR90Q96KV7 1748 aa14.23□□□□□ -0.13
NDUFA9-202ENST00000396655 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 TOMM70O94826 608 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 DDX46Q7L014 1031 aaKnown RBP14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 FAM89AQ96GI7 184 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
NDUFA9-202ENST00000396655 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.13
NDUFA9-202ENST00000396655 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms