RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
FXN-203ENST00000396366 POTECB2RU33 542 aa23.84■■□□□ 1.41
FXN-203ENST00000396366 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
FXN-203ENST00000396366 PARP10Q53GL7 1025 aa23.83■■□□□ 1.41
FXN-203ENST00000396366 UTP14AQ9BVJ6 771 aaKnown RBP23.83■■□□□ 1.41
FXN-203ENST00000396366 ZNF277Q9NRM2 450 aaPredicted RBP23.83■■□□□ 1.41
FXN-203ENST00000396366 VEGFAP15692 232 aaPredicted RBP23.82■■□□□ 1.4
FXN-203ENST00000396366 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
FXN-203ENST00000396366 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
FXN-203ENST00000396366 RPGRQ92834 1020 aaKnown RBP23.82■■□□□ 1.4
FXN-203ENST00000396366 ELL2O00472 640 aaPredicted RBP23.81■■□□□ 1.4
FXN-203ENST00000396366 HOXB7P09629 217 aa23.81■■□□□ 1.4
FXN-203ENST00000396366 FKBP4Q02790 459 aaKnown RBP eCLIP23.81■■□□□ 1.4
FXN-203ENST00000396366 TCIRG1Q13488 830 aa23.81■■□□□ 1.4
FXN-203ENST00000396366 DPY19L2Q6NUT2 758 aa23.81■■□□□ 1.4
FXN-203ENST00000396366 NLRP10Q86W26 655 aa23.81■■□□□ 1.4
FXN-203ENST00000396366 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
FXN-203ENST00000396366 ANKRD36CQ5JPF3 1778 aa23.8■■□□□ 1.4
FXN-203ENST00000396366 TCERG1O14776 1098 aaKnown RBP23.8■■□□□ 1.4
FXN-203ENST00000396366 DDNO94850 711 aaPredicted RBP23.8■■□□□ 1.4
FXN-203ENST00000396366 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
FXN-203ENST00000396366 RTKN2Q8IZC4 609 aa23.8■■□□□ 1.4
FXN-203ENST00000396366 IFT57Q9NWB7 429 aa23.8■■□□□ 1.4
FXN-203ENST00000396366 DBF4Q9UBU7 674 aaPredicted RBP23.8■■□□□ 1.4
FXN-203ENST00000396366 GNAI1P63096 354 aa23.79■■□□□ 1.4
FXN-203ENST00000396366 HCLS1P14317 486 aaPredicted RBP23.78■■□□□ 1.4
FXN-203ENST00000396366 APLP1P51693 650 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 HTRA3P83110 453 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 HSP90AB3PQ58FF7 597 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 RBM17Q96I25 401 aaKnown RBP23.78■■□□□ 1.4
FXN-203ENST00000396366 NLRP3Q96P20 1036 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 WDR90Q96KV7 1748 aa23.78■■□□□ 1.4
FXN-203ENST00000396366 SNED1Q8TER0 1413 aa23.77■■□□□ 1.4
FXN-203ENST00000396366 FSTL1Q12841 308 aa23.77■■□□□ 1.4
FXN-203ENST00000396366 ANKRD13DQ6ZTN6 518 aa23.77■■□□□ 1.4
FXN-203ENST00000396366 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
FXN-203ENST00000396366 TRMT112Q9UI30 125 aaKnown RBP23.77■■□□□ 1.4
FXN-203ENST00000396366 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
FXN-203ENST00000396366 PLBD2Q8NHP8 589 aa23.76■■□□□ 1.39
FXN-203ENST00000396366 ATP5J2-PTCD1G3V325 749 aa23.75■■□□□ 1.39
FXN-203ENST00000396366 SMC1BQ8NDV3 1235 aa23.75■■□□□ 1.39
FXN-203ENST00000396366 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
FXN-203ENST00000396366 LAMB2P55268 1798 aa23.75■■□□□ 1.39
FXN-203ENST00000396366 PPEF1O14829 653 aaPredicted RBP23.74■■□□□ 1.39
FXN-203ENST00000396366 IARSP41252 1262 aaKnown RBP23.74■■□□□ 1.39
FXN-203ENST00000396366 PHAXQ9H814 394 aaKnown RBP23.74■■□□□ 1.39
FXN-203ENST00000396366 MRS2Q9HD23 443 aa23.74■■□□□ 1.39
FXN-203ENST00000396366 ZNF541Q9H0D2 1346 aa23.74■■□□□ 1.39
FXN-203ENST00000396366 DNAJC5GQ8N7S2 189 aa23.73■■□□□ 1.39
FXN-203ENST00000396366 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
FXN-203ENST00000396366 ISCA1Q9BUE6 129 aa23.73■■□□□ 1.39
FXN-203ENST00000396366 ANP32CO43423 234 aa23.72■■□□□ 1.39
FXN-203ENST00000396366 TSPYL6Q8N831 410 aa23.72■■□□□ 1.39
FXN-203ENST00000396366 PSMD1Q99460 953 aa23.72■■□□□ 1.39
FXN-203ENST00000396366 ABCC4O15439 1325 aa23.72■■□□□ 1.39
FXN-203ENST00000396366 RNF123Q5XPI4 1314 aa23.71■■□□□ 1.39
FXN-203ENST00000396366 SH3TC1Q8TE82 1336 aa23.71■■□□□ 1.39
FXN-203ENST00000396366 POTEIP0CG38 1075 aa23.71■■□□□ 1.39
FXN-203ENST00000396366 POTEJP0CG39 1038 aa23.71■■□□□ 1.39
FXN-203ENST00000396366 CC2D2BQ6DHV5 1058 aa23.71■■□□□ 1.39
FXN-203ENST00000396366 TAF1P21675 1872 aa23.7■■□□□ 1.39
FXN-203ENST00000396366 COL4A5P29400 1685 aa23.7■■□□□ 1.39
FXN-203ENST00000396366 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
FXN-203ENST00000396366 WWC1Q8IX03 1113 aa23.7■■□□□ 1.38
FXN-203ENST00000396366 FAM89AQ96GI7 184 aa23.7■■□□□ 1.38
FXN-203ENST00000396366 FZD9O00144 591 aa23.69■■□□□ 1.38
FXN-203ENST00000396366 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
FXN-203ENST00000396366 ATP6V0A2Q9Y487 856 aa23.68■■□□□ 1.38
FXN-203ENST00000396366 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
FXN-203ENST00000396366 CCDC27Q2M243 656 aa23.67■■□□□ 1.38
FXN-203ENST00000396366 L3MBTL3Q96JM7 780 aaPredicted RBP23.67■■□□□ 1.38
FXN-203ENST00000396366 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
FXN-203ENST00000396366 BBOX1O75936 387 aa23.65■■□□□ 1.38
FXN-203ENST00000396366 GOLGA2Q08379 1002 aa23.65■■□□□ 1.38
FXN-203ENST00000396366 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
FXN-203ENST00000396366 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
FXN-203ENST00000396366 LARGE2Q8N3Y3 721 aa23.65■■□□□ 1.38
FXN-203ENST00000396366 JDP2Q8WYK2 163 aa23.65■■□□□ 1.38
FXN-203ENST00000396366 TRIM28Q13263 835 aaKnown RBP23.64■■□□□ 1.37
FXN-203ENST00000396366 CCDC30Q5VVM6 783 aa23.64■■□□□ 1.37
FXN-203ENST00000396366 MYD88Q99836 296 aa23.64■■□□□ 1.37
FXN-203ENST00000396366 TAF1DQ9H5J8 278 aaPredicted RBP23.64■■□□□ 1.37
FXN-203ENST00000396366 SCN4AP35499 1836 aa23.63■■□□□ 1.37
FXN-203ENST00000396366 IQCA1LA6NCM1 817 aa23.63■■□□□ 1.37
FXN-203ENST00000396366 CHADLQ6NUI6 762 aa23.63■■□□□ 1.37
FXN-203ENST00000396366 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
FXN-203ENST00000396366 GRAPQ13588 217 aa23.62■■□□□ 1.37
FXN-203ENST00000396366 AOC3Q16853 763 aa23.62■■□□□ 1.37
FXN-203ENST00000396366 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
FXN-203ENST00000396366 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
FXN-203ENST00000396366 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
FXN-203ENST00000396366 GJA3Q9Y6H8 435 aa23.62■■□□□ 1.37
FXN-203ENST00000396366 COL4A1P02462 1669 aa23.62■■□□□ 1.37
FXN-203ENST00000396366 IRS4O14654 1257 aaPredicted RBP23.61■■□□□ 1.37
FXN-203ENST00000396366 PPIP5K2O43314 1243 aa23.61■■□□□ 1.37
FXN-203ENST00000396366 GPC2Q8N158 579 aa23.61■■□□□ 1.37
FXN-203ENST00000396366 HACL1Q9UJ83 578 aa23.61■■□□□ 1.37
FXN-203ENST00000396366 EIF6P56537 245 aaKnown RBP23.6■■□□□ 1.37
FXN-203ENST00000396366 SF3B3Q15393 1217 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms