RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TPM3P06753 285 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 USP8P40818 1118 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 PPIP5K1Q6PFW1 1433 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 STRCP1A6NGW2 1772 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 ELF2Q15723 593 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 VPS72Q15906 364 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 FAM196AQ6ZSG2 479 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 NME9Q86XW9 330 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 RABEP2Q9H5N1 569 aa9.94□□□□□ -0.82
NDE1-202ENST00000396355 DCCP43146 1447 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 FCHSD2O94868 740 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 PEX19P40855 299 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 LRSAM1Q6UWE0 723 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 NCAPGQ9BPX3 1015 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 PIBF1Q8WXW3 757 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 ZSWIM4Q9H7M6 989 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
NDE1-202ENST00000396355 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
NDE1-202ENST00000396355 CEP57Q86XR8 500 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
NDE1-202ENST00000396355 MYO1CO00159 1063 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 ZNF853P0CG23 659 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 TPM1P09493 284 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 NLRP6P59044 892 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 ZNF397Q8NF99 534 aaPredicted RBP9.92□□□□□ -0.82
NDE1-202ENST00000396355 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
NDE1-202ENST00000396355 IL13P35225 146 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 GBP6Q6ZN66 633 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 CCDC186Q7Z3E2 898 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 SPON1Q9HCB6 807 aa9.92□□□□□ -0.82
NDE1-202ENST00000396355 MCM6Q14566 821 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 CAMK4Q16566 473 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 C1orf115Q9H7X2 142 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 IRAK4Q9NWZ3 460 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 RAI14Q9P0K7 980 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 ARHGEF10O15013 1369 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 EDC4Q6P2E9 1401 aaKnown RBP9.91□□□□□ -0.82
NDE1-202ENST00000396355 PTGS1P23219 599 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 NF2P35240 595 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 SUFUQ9UMX1 484 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 PTCH1Q13635 1447 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 VAMP4O75379 141 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
NDE1-202ENST00000396355 ALDH1L2Q3SY69 923 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
NDE1-202ENST00000396355 VPS37CA5D8V6 355 aaPredicted RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 URI1O94763 535 aaPredicted RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 NEK4P51957 841 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 NAP1L1P55209 391 aaKnown RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 ISM2Q6H9L7 571 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 NUCB1Q02818 461 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 NFE2L2Q16236 605 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 SIRT2Q8IXJ6 389 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 ZNF513Q8N8E2 541 aaPredicted RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 KIF18AQ8NI77 898 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 MBIPQ9NS73 344 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 CDR1P51861 262 aa9.9□□□□□ -0.82
NDE1-202ENST00000396355 GEMIN8Q9NWZ8 242 aaKnown RBP9.9□□□□□ -0.82
NDE1-202ENST00000396355 NRKQ7Z2Y5 1582 aa9.9□□□□□ -0.83
NDE1-202ENST00000396355 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 RAB3GAP1Q15042 981 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 MRPL50Q8N5N7 158 aaKnown RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 NUDT16Q96DE0 195 aaKnown RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 PRR36Q9H6K5 1346 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 ARHGAP29Q52LW3 1261 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 GIMAP6Q6P9H5 292 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 PSMD1Q99460 953 aa9.89□□□□□ -0.83
NDE1-202ENST00000396355 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
NDE1-202ENST00000396355 CXorf56Q9H5V9 222 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 MCCP23508 829 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 GPR162Q16538 588 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 C8orf58Q8NAV2 365 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 PLEKHA4Q9H4M7 779 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 PDRG1Q9NUG6 133 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 VPS18Q9P253 973 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 BIN2Q9UBW5 565 aaPredicted RBP9.88□□□□□ -0.83
NDE1-202ENST00000396355 RRP15Q9Y3B9 282 aaKnown RBP9.88□□□□□ -0.83
NDE1-202ENST00000396355 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.88□□□□□ -0.83
NDE1-202ENST00000396355 DDB1Q16531 1140 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 CHD1LQ86WJ1 897 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 BICD2Q8TD16 824 aa9.88□□□□□ -0.83
NDE1-202ENST00000396355 ABCC4O15439 1325 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 AATKQ6ZMQ8 1374 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 HMMRO75330 724 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms