RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NECTIN2Q92692 538 aa21.32■■□□□ 1
DDR1-229ENST00000396342 L3MBTL3Q96JM7 780 aaPredicted RBP21.32■■□□□ 1
DDR1-229ENST00000396342 CEP350Q5VT06 3117 aa21.32■■□□□ 1
DDR1-229ENST00000396342 ANKRD31Q8N7Z5 1873 aa21.31■■□□□ 1
DDR1-229ENST00000396342 POTECB2RU33 542 aa21.31■■□□□ 1
DDR1-229ENST00000396342 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
DDR1-229ENST00000396342 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
DDR1-229ENST00000396342 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
DDR1-229ENST00000396342 COPS6Q7L5N1 327 aa21.3■■□□□ 1
DDR1-229ENST00000396342 NIM1KQ8IY84 436 aa21.3■■□□□ 1
DDR1-229ENST00000396342 GPC2Q8N158 579 aa21.3■■□□□ 1
DDR1-229ENST00000396342 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
DDR1-229ENST00000396342 CREBZFQ9NS37 354 aa21.3■■□□□ 1
DDR1-229ENST00000396342 TIAM2Q8IVF5 1701 aa21.29■■□□□ 1
DDR1-229ENST00000396342 ABCC12Q96J65 1359 aa21.29■■□□□ 1
DDR1-229ENST00000396342 NTSR2O95665 410 aa21.29■■□□□ 1
DDR1-229ENST00000396342 EPHX2P34913 555 aa21.29■■□□□ 1
DDR1-229ENST00000396342 DDX46Q7L014 1031 aaKnown RBP21.29■■□□□ 1
DDR1-229ENST00000396342 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
DDR1-229ENST00000396342 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
DDR1-229ENST00000396342 GJA3Q9Y6H8 435 aa21.29■■□□□ 1
DDR1-229ENST00000396342 COL11A2P13942 1736 aaPredicted RBP21.29■■□□□ 1
DDR1-229ENST00000396342 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
DDR1-229ENST00000396342 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
DDR1-229ENST00000396342 OLFM4Q6UX06 510 aa21.28■■□□□ 1
DDR1-229ENST00000396342 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
DDR1-229ENST00000396342 WDR90Q96KV7 1748 aa21.28■■□□□ 1
DDR1-229ENST00000396342 RIC1Q4ADV7 1423 aa21.28■■□□□ 1
DDR1-229ENST00000396342 CHL1O00533 1208 aa21.27■■□□□ 1
DDR1-229ENST00000396342 BBOX1O75936 387 aa21.27■■□□□ 1
DDR1-229ENST00000396342 HOXB7P09629 217 aa21.27■■□□□ 1
DDR1-229ENST00000396342 VPS33BQ9H267 617 aa21.27■■□□□ 1
DDR1-229ENST00000396342 LAMB4A4D0S4 1761 aa21.27■■□□□ 1
DDR1-229ENST00000396342 SLX4Q8IY92 1834 aa21.27■□□□□ 0.99
DDR1-229ENST00000396342 FZD9O00144 591 aa21.26■□□□□ 0.99
DDR1-229ENST00000396342 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
DDR1-229ENST00000396342 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
DDR1-229ENST00000396342 SH3TC1Q8TE82 1336 aa21.26■□□□□ 0.99
DDR1-229ENST00000396342 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
DDR1-229ENST00000396342 PPIP5K2O43314 1243 aa21.25■□□□□ 0.99
DDR1-229ENST00000396342 ANXA1P04083 346 aa21.25■□□□□ 0.99
DDR1-229ENST00000396342 TCIRG1Q13488 830 aa21.25■□□□□ 0.99
DDR1-229ENST00000396342 PDIA6Q15084 440 aa21.25■□□□□ 0.99
DDR1-229ENST00000396342 SLC10A5Q5PT55 438 aa21.25■□□□□ 0.99
DDR1-229ENST00000396342 FER1L6Q2WGJ9 1857 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 KDM3BQ7LBC6 1761 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
DDR1-229ENST00000396342 TMC4Q7Z404 712 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 HYPKQ9NX55 129 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 ATP6V0A2Q9Y487 856 aa21.24■□□□□ 0.99
DDR1-229ENST00000396342 TMEM88BA6NKF7 163 aa21.23■□□□□ 0.99
DDR1-229ENST00000396342 PROSER3Q2NL68 480 aa21.23■□□□□ 0.99
DDR1-229ENST00000396342 NLRP10Q86W26 655 aa21.23■□□□□ 0.99
DDR1-229ENST00000396342 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
DDR1-229ENST00000396342 MKRN1Q9UHC7 482 aaKnown RBP21.23■□□□□ 0.99
DDR1-229ENST00000396342 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
DDR1-229ENST00000396342 PLBD2Q8NHP8 589 aa21.22■□□□□ 0.99
DDR1-229ENST00000396342 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
DDR1-229ENST00000396342 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
DDR1-229ENST00000396342 POTEIP0CG38 1075 aa21.21■□□□□ 0.99
DDR1-229ENST00000396342 POTEJP0CG39 1038 aa21.21■□□□□ 0.99
DDR1-229ENST00000396342 GOLGA2Q08379 1002 aa21.21■□□□□ 0.99
DDR1-229ENST00000396342 SP8Q8IXZ3 490 aa21.21■□□□□ 0.99
DDR1-229ENST00000396342 MPNDQ8N594 471 aa21.21■□□□□ 0.99
DDR1-229ENST00000396342 HSPA1AP0DMV8 641 aaKnown RBP21.2■□□□□ 0.98
DDR1-229ENST00000396342 HSPA1BP0DMV9 641 aaKnown RBP21.2■□□□□ 0.98
DDR1-229ENST00000396342 HCLS1P14317 486 aaPredicted RBP21.2■□□□□ 0.98
DDR1-229ENST00000396342 GNAI1P63096 354 aa21.2■□□□□ 0.98
DDR1-229ENST00000396342 TNS4Q8IZW8 715 aa21.2■□□□□ 0.98
DDR1-229ENST00000396342 CNTROBQ8N137 903 aa21.2■□□□□ 0.98
DDR1-229ENST00000396342 PRKRIP1Q9H875 184 aaPredicted RBP21.2■□□□□ 0.98
DDR1-229ENST00000396342 ARFGEF2Q9Y6D5 1785 aa21.19■□□□□ 0.98
DDR1-229ENST00000396342 GRAPQ13588 217 aa21.19■□□□□ 0.98
DDR1-229ENST00000396342 TNIP1Q15025 636 aa21.19■□□□□ 0.98
DDR1-229ENST00000396342 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
DDR1-229ENST00000396342 TRIM35Q9UPQ4 493 aa21.19■□□□□ 0.98
DDR1-229ENST00000396342 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
DDR1-229ENST00000396342 AOC3Q16853 763 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 DUSP27Q5VZP5 1158 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 LRP10Q7Z4F1 713 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 RIC3Q7Z5B4 369 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 BCL2L13Q9BXK5 485 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 ZNRF3Q9ULT6 936 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 ABT1Q9ULW3 272 aaKnown RBP21.18■□□□□ 0.98
DDR1-229ENST00000396342 ABCC4O15439 1325 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 CCDC88AQ3V6T2 1871 aa21.18■□□□□ 0.98
DDR1-229ENST00000396342 USP50Q70EL3 339 aaPredicted RBP21.17■□□□□ 0.98
DDR1-229ENST00000396342 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
DDR1-229ENST00000396342 DICER1Q9UPY3 1922 aaKnown RBP21.16■□□□□ 0.98
DDR1-229ENST00000396342 DDX58O95786 925 aaKnown RBP21.16■□□□□ 0.98
DDR1-229ENST00000396342 MAP1SQ66K74 1059 aaPredicted RBP21.16■□□□□ 0.98
DDR1-229ENST00000396342 C3orf67Q6ZVT6 689 aa21.16■□□□□ 0.98
DDR1-229ENST00000396342 PASKQ96RG2 1323 aa21.15■□□□□ 0.98
DDR1-229ENST00000396342 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
DDR1-229ENST00000396342 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
DDR1-229ENST00000396342 G3V3G9 751 aa21.14■□□□□ 0.97
DDR1-229ENST00000396342 APAF1O14727 1248 aa21.14■□□□□ 0.97
DDR1-229ENST00000396342 DCAF8Q5TAQ9 597 aa21.14■□□□□ 0.97
DDR1-229ENST00000396342 PAXIP1Q6ZW49 1069 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms