RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
PSEN1-204ENST00000394164 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-204ENST00000394164 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 USP48Q86UV5 1035 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-204ENST00000394164 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-204ENST00000394164 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
PSEN1-204ENST00000394164 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 NFAT5O94916 1531 aa11.88□□□□□ -0.51
PSEN1-204ENST00000394164 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 ERBB3P21860 1342 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-204ENST00000394164 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-204ENST00000394164 KCNF1Q9H3M0 494 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 C19orf44Q9H6X5 657 aa11.87□□□□□ -0.51
PSEN1-204ENST00000394164 PTH1RQ03431 593 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 GRM8O00222 908 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 AP5Z1O43299 807 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 CHGBP05060 677 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 G3BP1Q13283 466 aaKnown RBP eCLIP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-204ENST00000394164 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
PSEN1-204ENST00000394164 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
PSEN1-204ENST00000394164 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 ANKRD7Q92527 254 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-204ENST00000394164 SGSM2O43147 1006 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 PDIA6Q15084 440 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 OGFRQ9NZT2 677 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 LRRC37A3O60309 1634 aa11.85□□□□□ -0.51
PSEN1-204ENST00000394164 PHF14O94880 888 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 ADCK5Q3MIX3 580 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 ZBTB9Q96C00 473 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 NPHP1O15259 732 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 SASH1O94885 1247 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
PSEN1-204ENST00000394164 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
PSEN1-204ENST00000394164 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 BRD1O95696 1058 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 PHKG2P15735 406 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 PTGS1P23219 599 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 AK2P54819 239 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 KIAA1524Q8TCG1 905 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
PSEN1-204ENST00000394164 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 ST7Q9NRC1 585 aa11.84□□□□□ -0.51
PSEN1-204ENST00000394164 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.51
PSEN1-204ENST00000394164 TMEM94Q12767 1356 aa11.83□□□□□ -0.51
PSEN1-204ENST00000394164 CYP27B1O15528 508 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 FIBPO43427 364 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 KDM4AO75164 1064 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 HOXB7P09629 217 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 HSPA4P34932 840 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
PSEN1-204ENST00000394164 LARGE1O95461 756 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 LRMPQ12912 555 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
PSEN1-204ENST00000394164 LSG1Q9H089 658 aaKnown RBP11.83□□□□□ -0.52
PSEN1-204ENST00000394164 CABP4P57796 275 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-204ENST00000394164 FSD1Q9BTV5 496 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 C1orf167Q5SNV9 1468 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 CTNNA3Q9UI47 895 aa11.82□□□□□ -0.52
PSEN1-204ENST00000394164 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms