RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 GOLIM4O00461 696 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 IL2RBP14784 551 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 SASS6Q6UVJ0 657 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 RAD50Q92878 1312 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 GCKRQ14397 625 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 ERBB3P21860 1342 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 BECN2A8MW95 431 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 IFIT5Q13325 482 aaKnown RBP11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 PRAMEF22A3QJZ6 481 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 METTL24Q5JXM2 366 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
NKIRAS2-203ENST00000393879 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 ZSCAN22P10073 491 aaPredicted RBP11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 HSPA4P34932 840 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 TFCP2Q12800 502 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 USP16Q9Y5T5 823 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 EPB41L2O43491 1005 aaKnown RBP11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
NKIRAS2-203ENST00000393879 CPA1P15085 419 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 TRIM29Q14134 588 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 GPTP24298 496 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 TPM4P67936 248 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 CREB3L3Q68CJ9 461 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 VPS37DQ86XT2 251 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 DHX16O60231 1041 aaKnown RBP11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 HSP90AA2PQ14568 343 aaPredicted RBP11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
NKIRAS2-203ENST00000393879 IL15P40933 162 aaPredicted RBP11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 MPHOSPH8Q99549 860 aa11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 HSP90AB3PQ58FF7 597 aa11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 CCDC183Q5T5S1 534 aa11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
NKIRAS2-203ENST00000393879 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 CCDC192P0DO97 292 aa11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 POLA2Q14181 598 aa11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 VPS53Q5VIR6 699 aa11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 SNRKQ9NRH2 765 aa11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 EXOC5O00471 708 aa11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 TRMT112Q9UI30 125 aaKnown RBP11.71□□□□□ -0.54
NKIRAS2-203ENST00000393879 PKP1Q13835 747 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 UBE2Q2Q8WVN8 375 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 KIF2CQ99661 725 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 IDH1O75874 414 aaKnown RBP11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 TNMDQ9H2S6 317 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 RUFY3Q7L099 469 aa11.7□□□□□ -0.54
NKIRAS2-203ENST00000393879 SLIT1O75093 1534 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 ERICH2A1L162 156 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 LDHAL6AQ6ZMR3 332 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 SCAND2PQ9GZW5 306 aaPredicted RBP11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 CFAP45Q9UL16 551 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 CNPY2Q9Y2B0 182 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 A1BGP04217 495 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 UBE2HP62256 183 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
NKIRAS2-203ENST00000393879 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms