RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 ABCC3O15438 1527 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 CFAP65Q6ZU64 1925 aaKnown RBP8.43□□□□□ -1.06
NPHP1-203ENST00000393272 SGSM2O43147 1006 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 GUCY2CP25092 1073 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 SMC1AQ14683 1233 aaKnown RBP8.43□□□□□ -1.06
NPHP1-203ENST00000393272 TSGA10IPQ3SY00 556 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 STAP2Q9UGK3 403 aa8.43□□□□□ -1.06
NPHP1-203ENST00000393272 ZCCHC11Q5TAX3 1644 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 CPSF1Q10570 1443 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 YTHDC2Q9H6S0 1430 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 MAP2P11137 1827 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 A0A087WWV3 80 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 PNMA6EA0A0J9YXQ4 647 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 F6X3S4 739 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 LMAN1P49257 510 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 EFCAB2Q5VUJ9 269 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 LEO1Q8WVC0 666 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 MYCBPQ99417 103 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 JRKLQ9Y4A0 524 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 GNAI3P08754 354 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 ME3Q16798 604 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 ADCK5Q3MIX3 580 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 PGBD1Q96JS3 809 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 SLC26A8Q96RN1 970 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-203ENST00000393272 EPC1Q9H2F5 836 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 BRMS1Q9HCU9 246 aa8.42□□□□□ -1.06
NPHP1-203ENST00000393272 TADA3O75528 432 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 MYCNP04198 464 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 GOLGA6L1Q8N7Z2 621 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 AK7Q96M32 723 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 ADAM21Q9UKJ8 722 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 A0A1B0GUL7 405 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 CAVIN2O95810 425 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 CC2D1AQ6P1N0 951 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 MNS1Q8NEH6 495 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 JAKMIP1Q96N16 626 aaKnown RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 IL1RAPL2Q9NP60 686 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 PDRG1Q9NUG6 133 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 DNAI1Q9UI46 699 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 FRMPD1Q5SYB0 1578 aa8.41□□□□□ -1.06
NPHP1-203ENST00000393272 SETD1AO15047 1707 aaKnown RBP8.41□□□□□ -1.06
NPHP1-203ENST00000393272 BECN2A8MW95 431 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 FANCGO15287 622 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 GNAI2P04899 355 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 IFIT2P09913 472 aaKnown RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 GSDMDP57764 484 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 TTC31Q49AM3 519 aaPredicted RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 DHX40Q8IX18 779 aaKnown RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 GPATCH11Q8N954 259 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 EXOC4Q96A65 974 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 ATP8B1O43520 1251 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 SLC4A2P04920 1241 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 ACTN2P35609 894 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 SART3Q15020 963 aaKnown RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 CCDC158Q5M9N0 1113 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 VPS53Q5VIR6 699 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 HOMER1Q86YM7 354 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 POTEDQ86YR6 584 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 IQUBQ8NA54 791 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
NPHP1-203ENST00000393272 CARD6Q9BX69 1037 aa8.4□□□□□ -1.06
NPHP1-203ENST00000393272 HECW2Q9P2P5 1572 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 PSDA5PKW4 1024 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 H3BQF6 201 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 EVCP57679 992 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 ETF1P62495 437 aaKnown RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 STX1AQ16623 288 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 ARMCX5Q6P1M9 558 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 CWC27Q6UX04 472 aaKnown RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 G2E3Q7L622 706 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 OSBPL5Q9H0X9 879 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 ATP7AQ04656 1500 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 ADCY9O60503 1353 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 AOX1Q06278 1338 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 EFCAB8A8MWE9 144 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 APPP05067 770 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 IL13P35225 146 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 MAGEA9P43362 315 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms