RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
ZNF541-203ENST00000391901 CBX1P83916 185 aa16.88■□□□□ 0.29
ZNF541-203ENST00000391901 CCAR1Q8IX12 1150 aaKnown RBP16.88■□□□□ 0.29
ZNF541-203ENST00000391901 DCAF5Q96JK2 942 aa16.88■□□□□ 0.29
ZNF541-203ENST00000391901 CGNQ9P2M7 1197 aaKnown RBP16.88■□□□□ 0.29
ZNF541-203ENST00000391901 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
ZNF541-203ENST00000391901 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
ZNF541-203ENST00000391901 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 IL2RBP14784 551 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF541-203ENST00000391901 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 DACH1Q9UI36 760 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 INSRP06213 1382 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 CCDC112Q8NEF3 446 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 GOLGA8AA7E2F4 631 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 NEO1Q92859 1461 aa16.87■□□□□ 0.29
ZNF541-203ENST00000391901 POLR3DP05423 398 aaPredicted RBP16.87■□□□□ 0.29
ZNF541-203ENST00000391901 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
ZNF541-203ENST00000391901 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 CHMLP26374 656 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
ZNF541-203ENST00000391901 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 PPFIBP1Q86W92 1011 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
ZNF541-203ENST00000391901 SETQ01105 290 aaPredicted RBP16.85■□□□□ 0.29
ZNF541-203ENST00000391901 RNF41Q9H4P4 317 aaPredicted RBP16.85■□□□□ 0.29
ZNF541-203ENST00000391901 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
ZNF541-203ENST00000391901 STIM1Q13586 685 aa16.85■□□□□ 0.29
ZNF541-203ENST00000391901 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
ZNF541-203ENST00000391901 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 FSIP1Q8NA03 581 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 TTC41PQ6P2S7 1318 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
ZNF541-203ENST00000391901 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 TMEM67Q5HYA8 995 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 ZSCAN23Q3MJ62 389 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 NCOA7Q8NI08 942 aa16.84■□□□□ 0.29
ZNF541-203ENST00000391901 IARSP41252 1262 aaKnown RBP16.83■□□□□ 0.29
ZNF541-203ENST00000391901 USP19O94966 1318 aa16.83■□□□□ 0.28
ZNF541-203ENST00000391901 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
ZNF541-203ENST00000391901 ANO10Q9NW15 660 aa16.83■□□□□ 0.28
ZNF541-203ENST00000391901 ERVK-7P63135 1459 aa16.83■□□□□ 0.28
ZNF541-203ENST00000391901 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
ZNF541-203ENST00000391901 PNMA6EA0A0J9YXQ4 647 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 UBE2HP62256 183 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 TFCP2Q12800 502 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
ZNF541-203ENST00000391901 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
ZNF541-203ENST00000391901 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 DDX19AQ9NUU7 478 aaKnown RBP16.82■□□□□ 0.28
ZNF541-203ENST00000391901 CCP110O43303 1012 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 MCM5P33992 734 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 SF3B2Q13435 895 aaKnown RBP16.82■□□□□ 0.28
ZNF541-203ENST00000391901 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
ZNF541-203ENST00000391901 DDB1Q16531 1140 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 KLHL10Q6JEL2 608 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 SSRP1Q08945 709 aaKnown RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 SLC9C2Q5TAH2 1124 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 SIRT1Q96EB6 747 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 C6orf229H3BNL8 230 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 ZFYP08048 801 aaPredicted RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 AK2P54819 239 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 CCDC152Q4G0S7 254 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 RPGRQ92834 1020 aaKnown RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
ZNF541-203ENST00000391901 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 KDM5CP41229 1560 aa16.81■□□□□ 0.28
ZNF541-203ENST00000391901 BIN1O00499 593 aa16.8■□□□□ 0.28
ZNF541-203ENST00000391901 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
ZNF541-203ENST00000391901 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms