RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 HCLS1P14317 486 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 POU3F3P20264 500 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 RASA1P20936 1047 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 PTGER2P43116 358 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 GJA8P48165 433 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 SLC4A3P48751 1232 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF132P52740 706 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 IFT88Q13099 833 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 PTK7Q13308 1070 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 LRRC41Q15345 812 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 QPCTQ16769 361 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 CRTC2Q53ET0 693 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 HSP90B2PQ58FF3 399 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ARMC3Q5W041 872 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 TSHZ3Q63HK5 1081 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 KLHL10Q6JEL2 608 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 CCDC73Q6ZRK6 1079 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 LRP10Q7Z4F1 713 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 LCA5Q86VQ0 697 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 PLEKHM2Q8IWE5 1019 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 CPXCR1Q8N123 301 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 PPHLN1Q8NEY8 458 aaKnown RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 FAM200AQ8TCP9 573 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 APPBP2Q92624 585 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 SMARCC1Q92922 1105 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ITFG2Q969R8 447 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 TRIM52Q96A61 297 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 SKA1Q96BD8 255 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 BORCS6Q96GS4 357 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF496Q96IT1 587 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 TMEM87BQ96K49 555 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 SELENOOQ9BVL4 669 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 PDGFDQ9GZP0 370 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 CD248Q9HCU0 757 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 GPHNQ9NQX3 736 aaPredicted RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 LUZP4Q9P127 313 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 TMEM63CQ9P1W3 806 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 GTF2A1LQ9UNN4 478 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ATP8A1Q9Y2Q0 1164 aa4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 IPO5O00410 1097 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TREHO43280 583 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 MAP3K7O43318 606 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 FIBPO43427 364 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 KCNQ2O43526 872 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 COQ9O75208 318 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 BAIAP3O94812 1187 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 SCGB1D2O95969 90 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 HOXC13P31276 330 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 GJA5P36382 358 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 CHMP4BP1P59074 171 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 ZBED6P86452 979 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 NFX1Q12986 1120 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 WDR45BQ5MNZ6 344 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TAF3Q5VWG9 929 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 DUSP27Q5VZP5 1158 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 RSBN1LQ6PCB5 846 aaPredicted RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 C16orf54Q6UWD8 224 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 PODNQ7Z5L7 613 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 C14orf80Q86SX3 495 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 METTL3Q86U44 580 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 JAMLQ86YT9 394 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 IFNL2Q8IZJ0 200 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 ARL6IP6Q8N6S5 226 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 MIGA1Q8NAN2 632 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TTC8Q8TAM2 541 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 SH3TC2Q8TF17 1288 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 ATRIPQ8WXE1 791 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TBC1D20Q96BZ9 403 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 PGBD4Q96DM1 585 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TRMT2BQ96GJ1 504 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 MPP4Q96JB8 637 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 MS4A4AQ96JQ5 239 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 FAM210AQ96ND0 272 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 GPR101Q96P66 508 aaPredicted RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 SRPK1Q96SB4 655 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 DUSP9Q99956 384 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 RBCK1Q9BYM8 510 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 TSPY26PQ9H489 355 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 KANSL2Q9H9L4 492 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 SRA1Q9HD15 236 aaKnown RBP4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 RIC8AQ9NPQ8 531 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 FAM13BQ9NYF5 915 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 MAFFQ9ULX9 164 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 EMILIN1Q9Y6C2 1016 aa4.1□□□□□ -1.75
TRAJ17-201ENST00000390520 SHTN1A0MZ66 631 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 GTPBP10A4D1E9 387 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 KLRG2A4D1S0 409 aaPredicted RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L3A6NCW0 530 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L4A6NCW7 530 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 ALG1L2C9J202 215 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PPFIA3O75145 1194 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 LDHBP07195 334 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 TPM2P07951 284 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 NAT2P11245 290 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 RPL17P18621 184 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 ATF3P18847 181 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PMLP29590 882 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 DDIT3P35638 169 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms