RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 CBLBQ13191 982 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 ORC1Q13415 861 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 SEPT12Q8IYM1 358 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 C8orf48Q96LL4 319 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 CEP89Q96ST8 783 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 TERF2IPQ9NYB0 399 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
TRAV35-201ENST00000390462 GIPC1O14908 333 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
TRAV35-201ENST00000390462 ST13P50502 369 aaKnown RBP8.55□□□□□ -1.04
TRAV35-201ENST00000390462 EPHA4P54764 986 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
TRAV35-201ENST00000390462 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 MEI1Q5TIA1 1274 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 SH3RF1Q7Z6J0 888 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 KIAA0907Q7Z7F0 614 aaPredicted RBP8.55□□□□□ -1.04
TRAV35-201ENST00000390462 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
TRAV35-201ENST00000390462 SPSB2Q99619 263 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 DNAJC25Q9H1X3 360 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 COPRSQ9NQ92 184 aa8.55□□□□□ -1.04
TRAV35-201ENST00000390462 PDGFAP04085 211 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 NEFLP07196 543 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 MMP16P51512 607 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRAV35-201ENST00000390462 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 HOMER1Q86YM7 354 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 STAG2Q8N3U4 1231 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 EDEM1Q92611 657 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 C2orf49Q9BVC5 232 aaPredicted RBP8.54□□□□□ -1.04
TRAV35-201ENST00000390462 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
TRAV35-201ENST00000390462 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
TRAV35-201ENST00000390462 ESYT3A0FGR9 886 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 SH3BP5O60239 455 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 MASP1P48740 699 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 COPS2P61201 443 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 SLC10A4Q96EP9 437 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 MYO19Q96H55 970 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
TRAV35-201ENST00000390462 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
TRAV35-201ENST00000390462 SCNN1DP51172 638 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 GDF10P55107 478 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 LILRB2Q8N423 598 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 TRPM4Q8TD43 1214 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 PCGF6Q9BYE7 350 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 OSBPL7Q9BZF2 842 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 HOMER2Q9NSB8 354 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 TCEAL9Q9UHQ7 104 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 EID1Q9Y6B2 187 aa8.52□□□□□ -1.05
TRAV35-201ENST00000390462 MAFGO15525 162 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 PAX3P23760 479 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 C4orf46Q504U0 113 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 KIAA0825Q8IV33 1275 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 HNRNPLLQ8WVV9 542 aaKnown RBP8.51□□□□□ -1.05
TRAV35-201ENST00000390462 EFR3BQ9Y2G0 817 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 THRAP3Q9Y2W1 955 aaKnown RBP8.51□□□□□ -1.05
TRAV35-201ENST00000390462 R3HCC1Q9Y3T6 440 aaKnown RBP8.51□□□□□ -1.05
TRAV35-201ENST00000390462 ERCC6Q03468 1493 aa8.51□□□□□ -1.05
TRAV35-201ENST00000390462 CCDC85CA6NKD9 419 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
TRAV35-201ENST00000390462 CCSAPQ6IQ19 270 aaPredicted RBP8.5□□□□□ -1.05
TRAV35-201ENST00000390462 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 BPHLQ86WA6 291 aaPredicted RBP8.5□□□□□ -1.05
TRAV35-201ENST00000390462 PPARGC1BQ86YN6 1023 aaKnown RBP8.5□□□□□ -1.05
TRAV35-201ENST00000390462 RELTQ969Z4 430 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 DNAJC7Q99615 494 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 KBTBD4Q9NVX7 518 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 FAM8A1Q9UBU6 413 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 SERTAD1Q9UHV2 236 aa8.5□□□□□ -1.05
TRAV35-201ENST00000390462 TLL1O43897 1013 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 CPNE3O75131 537 aaKnown RBP8.49□□□□□ -1.05
TRAV35-201ENST00000390462 ADH1BP00325 375 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
TRAV35-201ENST00000390462 PCSK2P16519 638 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 SCTRP47872 440 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 UBE4AQ14139 1066 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 C16orf86Q6ZW13 317 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 CCDC113Q9H0I3 377 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
TRAV35-201ENST00000390462 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 TMEM260Q9NX78 707 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
TRAV35-201ENST00000390462 ZPR1O75312 459 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
TRAV35-201ENST00000390462 INHAP05111 366 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 USP17L7P0C7H9 530 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 ZAP70P43403 619 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 AGERQ15109 404 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
TRAV35-201ENST00000390462 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms