RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 RTKN2Q8IZC4 609 aa9.38□□□□□ -0.91
TRAV27-201ENST00000390457 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
TRAV27-201ENST00000390457 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
TRAV27-201ENST00000390457 NUDCQ9Y266 331 aa9.38□□□□□ -0.91
TRAV27-201ENST00000390457 COL4A5P29400 1685 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 NPHP1O15259 732 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 U2AF1L5P0DN76 240 aaPredicted RBP9.37□□□□□ -0.91
TRAV27-201ENST00000390457 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 HOXA10P31260 410 aaPredicted RBP9.37□□□□□ -0.91
TRAV27-201ENST00000390457 U2AF1Q01081 240 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRAV27-201ENST00000390457 SYNE4Q8N205 404 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 RTF1Q92541 710 aaKnown RBP9.37□□□□□ -0.91
TRAV27-201ENST00000390457 PSMD1Q99460 953 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 ABCC12Q96J65 1359 aa9.37□□□□□ -0.91
TRAV27-201ENST00000390457 RASSF10A6NK89 507 aa9.36□□□□□ -0.91
TRAV27-201ENST00000390457 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
TRAV27-201ENST00000390457 EPHX2P34913 555 aa9.36□□□□□ -0.91
TRAV27-201ENST00000390457 IARSP41252 1262 aaKnown RBP9.36□□□□□ -0.91
TRAV27-201ENST00000390457 MIS18AQ9NYP9 233 aa9.36□□□□□ -0.91
TRAV27-201ENST00000390457 RIC1Q4ADV7 1423 aa9.36□□□□□ -0.91
TRAV27-201ENST00000390457 NUP98P52948 1817 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
TRAV27-201ENST00000390457 LTBP1Q14766 1721 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 CC2D2BQ6DHV5 1058 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 SLC51AQ86UW1 340 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 PNMA8AQ86V59 439 aaPredicted RBP9.35□□□□□ -0.91
TRAV27-201ENST00000390457 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 GPC2Q8N158 579 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
TRAV27-201ENST00000390457 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
TRAV27-201ENST00000390457 LAMB4A4D0S4 1761 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
TRAV27-201ENST00000390457 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
TRAV27-201ENST00000390457 UBN2Q6ZU65 1347 aa9.34□□□□□ -0.91
TRAV27-201ENST00000390457 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
TRAV27-201ENST00000390457 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
TRAV27-201ENST00000390457 MAP1SQ66K74 1059 aaPredicted RBP9.34□□□□□ -0.91
TRAV27-201ENST00000390457 LRP10Q7Z4F1 713 aa9.34□□□□□ -0.91
TRAV27-201ENST00000390457 NUTM1Q86Y26 1132 aa9.34□□□□□ -0.91
TRAV27-201ENST00000390457 ZNF34Q8IZ26 560 aa9.34□□□□□ -0.91
TRAV27-201ENST00000390457 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 NTSR2O95665 410 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 SCNN1DP51172 638 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 SUSD4Q5VX71 490 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
TRAV27-201ENST00000390457 CRAMP1Q96RY5 1269 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 NYXQ9GZU5 481 aa9.33□□□□□ -0.92
TRAV27-201ENST00000390457 HSPA8P11142 646 aaKnown RBP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 EPS15P42566 896 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 PDIA6Q15084 440 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 DEFB115Q30KQ5 88 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 JDP2Q8WYK2 163 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
TRAV27-201ENST00000390457 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
TRAV27-201ENST00000390457 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
TRAV27-201ENST00000390457 GPTP24298 496 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 LBX1P52954 281 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 CST9Q5W186 159 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 NGEFQ8N5V2 710 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 THUMPD2Q9BTF0 503 aaKnown RBP9.31□□□□□ -0.92
TRAV27-201ENST00000390457 THSD7BQ9C0I4 1608 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
TRAV27-201ENST00000390457 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
TRAV27-201ENST00000390457 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
TRAV27-201ENST00000390457 RBM17Q96I25 401 aaKnown RBP9.3□□□□□ -0.92
TRAV27-201ENST00000390457 RTFDC1Q9BY42 306 aaPredicted RBP9.3□□□□□ -0.92
TRAV27-201ENST00000390457 VPS33BQ9H267 617 aa9.3□□□□□ -0.92
TRAV27-201ENST00000390457 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
TRAV27-201ENST00000390457 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
TRAV27-201ENST00000390457 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
TRAV27-201ENST00000390457 MYL6BP14649 208 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
TRAV27-201ENST00000390457 PARP10Q53GL7 1025 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 KIF6Q6ZMV9 814 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 USP50Q70EL3 339 aaPredicted RBP9.29□□□□□ -0.92
TRAV27-201ENST00000390457 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 RPGRQ92834 1020 aaKnown RBP9.29□□□□□ -0.92
TRAV27-201ENST00000390457 PGAP2Q9UHJ9 254 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 ATP6V0A2Q9Y487 856 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
TRAV27-201ENST00000390457 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
TRAV27-201ENST00000390457 TRAF5O00463 557 aa9.28□□□□□ -0.92
TRAV27-201ENST00000390457 LMOD1P29536 600 aaPredicted RBP9.28□□□□□ -0.92
TRAV27-201ENST00000390457 CXCL9Q07325 125 aa9.28□□□□□ -0.92
TRAV27-201ENST00000390457 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms