RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 PSMD1Q99460 953 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 RNF123Q5XPI4 1314 aa11.83□□□□□ -0.52
TRAV20-201ENST00000390448 FZD9O00144 591 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
TRAV20-201ENST00000390448 RIPK4P57078 832 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 CRY2Q49AN0 593 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
TRAV20-201ENST00000390448 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
TRAV20-201ENST00000390448 LMOD3Q0VAK6 560 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
TRAV20-201ENST00000390448 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
TRAV20-201ENST00000390448 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
TRAV20-201ENST00000390448 ABT1Q9ULW3 272 aaKnown RBP11.81□□□□□ -0.52
TRAV20-201ENST00000390448 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
TRAV20-201ENST00000390448 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
TRAV20-201ENST00000390448 AIMP1Q12904 312 aaKnown RBP11.8□□□□□ -0.52
TRAV20-201ENST00000390448 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
TRAV20-201ENST00000390448 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
TRAV20-201ENST00000390448 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
TRAV20-201ENST00000390448 PASKQ96RG2 1323 aa11.8□□□□□ -0.52
TRAV20-201ENST00000390448 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 VEGFBP49765 207 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
TRAV20-201ENST00000390448 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
TRAV20-201ENST00000390448 SCN4AP35499 1836 aa11.79□□□□□ -0.52
TRAV20-201ENST00000390448 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
TRAV20-201ENST00000390448 NTSR2O95665 410 aa11.78□□□□□ -0.52
TRAV20-201ENST00000390448 CTCFP49711 727 aaPredicted RBP11.78□□□□□ -0.52
TRAV20-201ENST00000390448 RALBP1Q15311 655 aa11.78□□□□□ -0.52
TRAV20-201ENST00000390448 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
TRAV20-201ENST00000390448 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
TRAV20-201ENST00000390448 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
TRAV20-201ENST00000390448 FOXN1O15353 648 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 ANXA1P04083 346 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 GRM1Q13255 1194 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 AOC3Q16853 763 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
TRAV20-201ENST00000390448 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
TRAV20-201ENST00000390448 ATP6V0A2Q9Y487 856 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
TRAV20-201ENST00000390448 BBOX1O75936 387 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
TRAV20-201ENST00000390448 EPS15P42566 896 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 WDR43Q15061 677 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAV20-201ENST00000390448 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
TRAV20-201ENST00000390448 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
TRAV20-201ENST00000390448 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 VPS33BQ9H267 617 aa11.76□□□□□ -0.53
TRAV20-201ENST00000390448 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAV20-201ENST00000390448 NUP98P52948 1817 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
TRAV20-201ENST00000390448 MAP2K1Q02750 393 aaPredicted RBP11.75□□□□□ -0.53
TRAV20-201ENST00000390448 PDIA6Q15084 440 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 CCDC146Q8IYE0 955 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 MPNDQ8N594 471 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 ZNRF3Q9ULT6 936 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 RIC1Q4ADV7 1423 aa11.75□□□□□ -0.53
TRAV20-201ENST00000390448 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 RASSF10A6NK89 507 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 ECE1P42892 770 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 SCNN1DP51172 638 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
TRAV20-201ENST00000390448 ABCC4O15439 1325 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
TRAV20-201ENST00000390448 WDR33Q9C0J8 1336 aaKnown RBP11.74□□□□□ -0.53
TRAV20-201ENST00000390448 LBX1P52954 281 aa11.73□□□□□ -0.53
TRAV20-201ENST00000390448 DDX10Q13206 875 aaKnown RBP11.73□□□□□ -0.53
TRAV20-201ENST00000390448 TNIP1Q15025 636 aa11.73□□□□□ -0.53
TRAV20-201ENST00000390448 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
TRAV20-201ENST00000390448 GPRC5DQ9NZD1 345 aa11.73□□□□□ -0.53
TRAV20-201ENST00000390448 TRAF5O00463 557 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 RAD17O75943 681 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 GMPSP49915 693 aaPredicted RBP11.72□□□□□ -0.53
TRAV20-201ENST00000390448 CXCL9Q07325 125 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 GRAPQ13588 217 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms