RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 VEGFBP49765 207 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 EIF4A1P60842 406 aaKnown RBP12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 GPC2Q8N158 579 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
TRBV3-1-201ENST00000390387 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 CC2D2BQ6DHV5 1058 aa12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
TRBV3-1-201ENST00000390387 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 NUP98P52948 1817 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 GPTP24298 496 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
TRBV3-1-201ENST00000390387 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 MYL6BP14649 208 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 ZNF34Q8IZ26 560 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
TRBV3-1-201ENST00000390387 NTSR2O95665 410 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 NEFMP07197 916 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 SCNN1DP51172 638 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 AIDAQ96BJ3 306 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 GJA3Q9Y6H8 435 aa12.35□□□□□ -0.43
TRBV3-1-201ENST00000390387 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
TRBV3-1-201ENST00000390387 EPS15P42566 896 aa12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
TRBV3-1-201ENST00000390387 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 LMOD1P29536 600 aaPredicted RBP12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 LBX1P52954 281 aa12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 PDIA6Q15084 440 aa12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 MAPK8IP3Q9UPT6 1336 aa12.32□□□□□ -0.44
TRBV3-1-201ENST00000390387 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 ABT1Q9ULW3 272 aaKnown RBP12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 ABCC4O15439 1325 aa12.31□□□□□ -0.44
TRBV3-1-201ENST00000390387 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 ANXA1P04083 346 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 NIM1KQ8IY84 436 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
TRBV3-1-201ENST00000390387 TRAF5O00463 557 aa12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 AOC3Q16853 763 aa12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 CST9Q5W186 159 aa12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
TRBV3-1-201ENST00000390387 CXCL9Q07325 125 aa12.28□□□□□ -0.44
TRBV3-1-201ENST00000390387 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
TRBV3-1-201ENST00000390387 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
TRBV3-1-201ENST00000390387 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
TRBV3-1-201ENST00000390387 GPRC5DQ9NZD1 345 aa12.28□□□□□ -0.44
TRBV3-1-201ENST00000390387 RIPK4P57078 832 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 LAMB2P55268 1798 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 ANKRD36CQ5JPF3 1778 aa12.27□□□□□ -0.45
TRBV3-1-201ENST00000390387 BBOX1O75936 387 aa12.26□□□□□ -0.45
TRBV3-1-201ENST00000390387 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms