RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 MYD88Q99836 296 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 ALDH1L1O75891 902 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 TTC14Q96N46 770 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 CNPY2Q9Y2B0 182 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 N4BP2Q86UW6 1770 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 KCNJ4P48050 445 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 ZNF790Q6PG37 636 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 LINS1Q8NG48 757 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 ERBB3P21860 1342 aa14.03□□□□□ -0.16
RAPGEF3-201ENST00000389212 RPAP1Q9BWH6 1393 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF3-201ENST00000389212 MPNDQ8N594 471 aa14.02□□□□□ -0.16
RAPGEF3-201ENST00000389212 ZNF496Q96IT1 587 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF3-201ENST00000389212 PPP1R9BQ96SB3 815 aa14.02□□□□□ -0.16
RAPGEF3-201ENST00000389212 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.16
RAPGEF3-201ENST00000389212 NPHP4O75161 1426 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 CHGBP05060 677 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 MTX1Q13505 466 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 NECAB1Q8N987 351 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 USP16Q9Y5T5 823 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 TTC41PQ6P2S7 1318 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 LRSAM1Q6UWE0 723 aa14.02□□□□□ -0.17
RAPGEF3-201ENST00000389212 TCHHQ07283 1943 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 PTCD1O75127 700 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 OFD1O75665 1012 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 ZSCAN30Q86W11 494 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 TSC1Q92574 1164 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 TRERF1Q96PN7 1200 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 MTERF4Q7Z6M4 381 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
RAPGEF3-201ENST00000389212 RGPD5Q99666 1765 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 FIBPO43427 364 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 SYT1P21579 422 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 GPATCH3Q96I76 525 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 SMC3Q9UQE7 1217 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 WDR33Q9C0J8 1336 aaKnown RBP14□□□□□ -0.17
RAPGEF3-201ENST00000389212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-201ENST00000389212 PDRG1Q9NUG6 133 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 A0A0D9SFI3 127 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 FSD1Q9BTV5 496 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 SLC52A2Q9HAB3 445 aa14□□□□□ -0.17
RAPGEF3-201ENST00000389212 RBM8AQ9Y5S9 174 aaKnown RBP14□□□□□ -0.17
RAPGEF3-201ENST00000389212 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 MBD3O95983 291 aa13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 NEURL1BA8MQ27 555 aa13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-201ENST00000389212 STX6O43752 255 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 GJB2P29033 226 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 EVI5LQ96CN4 794 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 CCDC171Q6TFL3 1326 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 PHKG2P15735 406 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 ZSCAN22P10073 491 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 NEXNQ0ZGT2 675 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 UBE3BQ7Z3V4 1068 aa13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 CCDC94Q9BW85 323 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-201ENST00000389212 ST3GAL1Q11201 340 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 GCKRQ14397 625 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 ME3Q16798 604 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 ZNF589Q86UQ0 364 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
RAPGEF3-201ENST00000389212 CYP27B1O15528 508 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 SLIT3O75094 1523 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 STK3Q13188 491 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 NECTIN1Q15223 517 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 UTP14CQ5TAP6 766 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 MEGF6O75095 1541 aa13.96□□□□□ -0.17
RAPGEF3-201ENST00000389212 KIF20AO95235 890 aa13.96□□□□□ -0.18
RAPGEF3-201ENST00000389212 DNM1Q05193 864 aaKnown RBP13.96□□□□□ -0.18
RAPGEF3-201ENST00000389212 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.18
RAPGEF3-201ENST00000389212 TSPY26PQ9H489 355 aa13.96□□□□□ -0.18
RAPGEF3-201ENST00000389212 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.18
RAPGEF3-201ENST00000389212 F13A1P00488 732 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms