RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ATP8B2P98198 1209 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 PROSER3Q2NL68 480 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 ZNF594Q96JF6 807 aaPredicted RBP22.25■■□□□ 1.15
CSPG5-202ENST00000383738 FSD2A1L4K1 749 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 RAB11FIP3O75154 756 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 PSMA5P28066 241 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 TDO2P48775 406 aa22.25■■□□□ 1.15
CSPG5-202ENST00000383738 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
CSPG5-202ENST00000383738 TIMM10P62072 90 aa22.24■■□□□ 1.15
CSPG5-202ENST00000383738 CD2BP2O95400 341 aaKnown RBP22.24■■□□□ 1.15
CSPG5-202ENST00000383738 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
CSPG5-202ENST00000383738 SLC52A2Q9HAB3 445 aa22.24■■□□□ 1.15
CSPG5-202ENST00000383738 GNL3LQ9NVN8 582 aaKnown RBP22.24■■□□□ 1.15
CSPG5-202ENST00000383738 USP6P35125 1406 aa22.23■■□□□ 1.15
CSPG5-202ENST00000383738 NBPF5PQ86XG9 351 aaPredicted RBP22.23■■□□□ 1.15
CSPG5-202ENST00000383738 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
CSPG5-202ENST00000383738 NOLC1Q14978 699 aaKnown RBP eCLIP22.23■■□□□ 1.15
CSPG5-202ENST00000383738 TRMT1Q9NXH9 659 aaKnown RBP22.23■■□□□ 1.15
CSPG5-202ENST00000383738 TTC22Q5TAA0 569 aa22.23■■□□□ 1.15
CSPG5-202ENST00000383738 KDM5AP29375 1690 aaKnown RBP22.22■■□□□ 1.15
CSPG5-202ENST00000383738 C6orf229H3BNL8 230 aa22.22■■□□□ 1.15
CSPG5-202ENST00000383738 LRSAM1Q6UWE0 723 aa22.22■■□□□ 1.15
CSPG5-202ENST00000383738 LRRC2Q9BYS8 371 aa22.22■■□□□ 1.15
CSPG5-202ENST00000383738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.22■■□□□ 1.15
CSPG5-202ENST00000383738 CEP152O94986 1710 aa22.22■■□□□ 1.15
CSPG5-202ENST00000383738 AIDAQ96BJ3 306 aa22.22■■□□□ 1.15
CSPG5-202ENST00000383738 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
CSPG5-202ENST00000383738 CCDC83Q8IWF9 413 aa22.21■■□□□ 1.15
CSPG5-202ENST00000383738 ARHGAP31Q2M1Z3 1444 aa22.21■■□□□ 1.15
CSPG5-202ENST00000383738 HIP1O00291 1037 aa22.21■■□□□ 1.15
CSPG5-202ENST00000383738 PDRG1Q9NUG6 133 aa22.21■■□□□ 1.15
CSPG5-202ENST00000383738 TEX13AQ9BXU3 409 aaPredicted RBP22.2■■□□□ 1.15
CSPG5-202ENST00000383738 IKQ13123 557 aaPredicted RBP22.2■■□□□ 1.14
CSPG5-202ENST00000383738 PLCD3Q8N3E9 789 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 E9PCH4 1651 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 BRINP3Q76B58 766 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 DCTPP1Q9H773 170 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 ASAP1Q9ULH1 1129 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 CCDC192P0DO97 292 aa22.2■■□□□ 1.14
CSPG5-202ENST00000383738 ZFP91Q96JP5 570 aaPredicted RBP22.2■■□□□ 1.14
CSPG5-202ENST00000383738 ARAP3Q8WWN8 1544 aa22.19■■□□□ 1.14
CSPG5-202ENST00000383738 PES1O00541 588 aaKnown RBP22.19■■□□□ 1.14
CSPG5-202ENST00000383738 TTLL7Q6ZT98 887 aa22.19■■□□□ 1.14
CSPG5-202ENST00000383738 PHKG2P15735 406 aa22.19■■□□□ 1.14
CSPG5-202ENST00000383738 TMX3Q96JJ7 454 aa22.19■■□□□ 1.14
CSPG5-202ENST00000383738 VGLL3A8MV65 326 aa22.18■■□□□ 1.14
CSPG5-202ENST00000383738 GUCY1B3Q02153 619 aa22.18■■□□□ 1.14
CSPG5-202ENST00000383738 ZSCAN29Q8IWY8 852 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-202ENST00000383738 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-202ENST00000383738 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-202ENST00000383738 SDF4Q9BRK5 362 aa22.18■■□□□ 1.14
CSPG5-202ENST00000383738 TNMDQ9H2S6 317 aa22.18■■□□□ 1.14
CSPG5-202ENST00000383738 TFIP11Q9UBB9 837 aaKnown RBP22.18■■□□□ 1.14
CSPG5-202ENST00000383738 MNS1Q8NEH6 495 aa22.18■■□□□ 1.14
CSPG5-202ENST00000383738 GNPATO15228 680 aa22.17■■□□□ 1.14
CSPG5-202ENST00000383738 SNX21Q969T3 373 aa22.17■■□□□ 1.14
CSPG5-202ENST00000383738 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.17■■□□□ 1.14
CSPG5-202ENST00000383738 TFCP2Q12800 502 aa22.17■■□□□ 1.14
CSPG5-202ENST00000383738 LARP1BQ659C4 914 aaKnown RBP22.16■■□□□ 1.14
CSPG5-202ENST00000383738 PLEKHM2Q8IWE5 1019 aa22.16■■□□□ 1.14
CSPG5-202ENST00000383738 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
CSPG5-202ENST00000383738 INSRP06213 1382 aa22.16■■□□□ 1.14
CSPG5-202ENST00000383738 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
CSPG5-202ENST00000383738 MAP3K4Q9Y6R4 1608 aa22.16■■□□□ 1.14
CSPG5-202ENST00000383738 ZNF622Q969S3 477 aaKnown RBP eCLIP22.16■■□□□ 1.14
CSPG5-202ENST00000383738 NOL7Q9UMY1 257 aaKnown RBP22.16■■□□□ 1.14
CSPG5-202ENST00000383738 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
CSPG5-202ENST00000383738 CCT2P78371 535 aaKnown RBP22.15■■□□□ 1.14
CSPG5-202ENST00000383738 USP21Q9UK80 565 aa22.15■■□□□ 1.14
CSPG5-202ENST00000383738 SETDB2Q96T68 719 aa22.15■■□□□ 1.14
CSPG5-202ENST00000383738 SHROOM2Q13796 1616 aa22.15■■□□□ 1.14
CSPG5-202ENST00000383738 ALDH1L1O75891 902 aa22.14■■□□□ 1.14
CSPG5-202ENST00000383738 TTLL5Q6EMB2 1281 aa22.14■■□□□ 1.14
CSPG5-202ENST00000383738 CNPY2Q9Y2B0 182 aa22.14■■□□□ 1.14
CSPG5-202ENST00000383738 SMC2O95347 1197 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 TNNT1P13805 278 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 U2AF2P26368 475 aaKnown RBP eCLIP22.14■■□□□ 1.13
CSPG5-202ENST00000383738 SUCLG2Q96I99 432 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 MCM2P49736 904 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 TPM4P67936 248 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC144CPQ8IYA2 1237 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 RPGRQ92834 1020 aaKnown RBP22.14■■□□□ 1.13
CSPG5-202ENST00000383738 EDC3Q96F86 508 aaKnown RBP22.14■■□□□ 1.13
CSPG5-202ENST00000383738 TMEM63CQ9P1W3 806 aa22.14■■□□□ 1.13
CSPG5-202ENST00000383738 CPA1P15085 419 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 USP44Q9H0E7 712 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 USP48Q86UV5 1035 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 NACAP1Q9BZK3 213 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 UNC13BO14795 1591 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 ERBB3P21860 1342 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC66A2RUB6 948 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 ZNF521Q96K83 1311 aa22.13■■□□□ 1.13
CSPG5-202ENST00000383738 POLR3GO15318 223 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-202ENST00000383738 SART3Q15020 963 aaKnown RBP22.12■■□□□ 1.13
CSPG5-202ENST00000383738 ATP2B3Q16720 1220 aa22.12■■□□□ 1.13
CSPG5-202ENST00000383738 F8W031 263 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms