RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 PRDM10Q9NQV6 1147 aa29.94■■■□□ 2.38
VLDLR-201ENST00000382096 HOXA10P31260 410 aaPredicted RBP29.93■■■□□ 2.38
VLDLR-201ENST00000382096 EIF4A1P60842 406 aaKnown RBP29.93■■■□□ 2.38
VLDLR-201ENST00000382096 RALBP1Q15311 655 aa29.93■■■□□ 2.38
VLDLR-201ENST00000382096 KIF6Q6ZMV9 814 aa29.93■■■□□ 2.38
VLDLR-201ENST00000382096 NGEFQ8N5V2 710 aa29.93■■■□□ 2.38
VLDLR-201ENST00000382096 PNNQ9H307 717 aaKnown RBP29.93■■■□□ 2.38
VLDLR-201ENST00000382096 UBN2Q6ZU65 1347 aa29.93■■■□□ 2.38
VLDLR-201ENST00000382096 TTLL7Q6ZT98 887 aa29.92■■■□□ 2.38
VLDLR-201ENST00000382096 CNTROBQ8N137 903 aa29.92■■■□□ 2.38
VLDLR-201ENST00000382096 TRPM7Q96QT4 1865 aa29.91■■■□□ 2.38
VLDLR-201ENST00000382096 GRIPAP1Q4V328 841 aa29.91■■■□□ 2.38
VLDLR-201ENST00000382096 MAP1SQ66K74 1059 aaPredicted RBP29.91■■■□□ 2.38
VLDLR-201ENST00000382096 RPGRQ92834 1020 aaKnown RBP29.91■■■□□ 2.38
VLDLR-201ENST00000382096 RRP7AQ9Y3A4 280 aaKnown RBP29.91■■■□□ 2.38
VLDLR-201ENST00000382096 RASSF10A6NK89 507 aa29.9■■■□□ 2.38
VLDLR-201ENST00000382096 AIDAQ96BJ3 306 aa29.9■■■□□ 2.38
VLDLR-201ENST00000382096 CTCFP49711 727 aaPredicted RBP29.89■■■□□ 2.38
VLDLR-201ENST00000382096 ANKRD36CQ5JPF3 1778 aa29.89■■■□□ 2.38
VLDLR-201ENST00000382096 THSD7BQ9C0I4 1608 aa29.89■■■□□ 2.37
VLDLR-201ENST00000382096 MYL6BP14649 208 aa29.88■■■□□ 2.37
VLDLR-201ENST00000382096 GPTP24298 496 aa29.88■■■□□ 2.37
VLDLR-201ENST00000382096 EIF6P56537 245 aaKnown RBP29.88■■■□□ 2.37
VLDLR-201ENST00000382096 ZBTB3Q9H5J0 574 aa29.88■■■□□ 2.37
VLDLR-201ENST00000382096 WBP1LQ9NX94 342 aa29.88■■■□□ 2.37
VLDLR-201ENST00000382096 LAMB2P55268 1798 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 SUSD4Q5VX71 490 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 ZNF34Q8IZ26 560 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 CRAMP1Q96RY5 1269 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 ERBB4Q15303 1308 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 MAPK8IP3Q9UPT6 1336 aa29.87■■■□□ 2.37
VLDLR-201ENST00000382096 NTSR2O95665 410 aa29.86■■■□□ 2.37
VLDLR-201ENST00000382096 THUMPD2Q9BTF0 503 aaKnown RBP29.86■■■□□ 2.37
VLDLR-201ENST00000382096 DEFB115Q30KQ5 88 aa29.85■■■□□ 2.37
VLDLR-201ENST00000382096 GIGYF2Q6Y7W6 1299 aaKnown RBP29.85■■■□□ 2.37
VLDLR-201ENST00000382096 RBM17Q96I25 401 aaKnown RBP29.85■■■□□ 2.37
VLDLR-201ENST00000382096 GJA3Q9Y6H8 435 aa29.85■■■□□ 2.37
VLDLR-201ENST00000382096 LMOD1P29536 600 aaPredicted RBP29.84■■■□□ 2.37
VLDLR-201ENST00000382096 SCNN1DP51172 638 aa29.84■■■□□ 2.37
VLDLR-201ENST00000382096 PPEF1O14829 653 aaPredicted RBP29.83■■■□□ 2.37
VLDLR-201ENST00000382096 LARGE2Q8N3Y3 721 aa29.83■■■□□ 2.37
VLDLR-201ENST00000382096 SLC51AQ86UW1 340 aa29.82■■■□□ 2.36
VLDLR-201ENST00000382096 DDX21Q9NR30 783 aaKnown RBP eCLIP29.82■■■□□ 2.36
VLDLR-201ENST00000382096 DDX10Q13206 875 aaKnown RBP29.81■■■□□ 2.36
VLDLR-201ENST00000382096 PARP10Q53GL7 1025 aa29.81■■■□□ 2.36
VLDLR-201ENST00000382096 C3orf67Q6ZVT6 689 aa29.81■■■□□ 2.36
VLDLR-201ENST00000382096 PPP1R42Q7Z4L9 355 aa29.81■■■□□ 2.36
VLDLR-201ENST00000382096 WDR33Q9C0J8 1336 aaKnown RBP29.8■■■□□ 2.36
VLDLR-201ENST00000382096 EPS15P42566 896 aa29.8■■■□□ 2.36
VLDLR-201ENST00000382096 LRP10Q7Z4F1 713 aa29.8■■■□□ 2.36
VLDLR-201ENST00000382096 ABT1Q9ULW3 272 aaKnown RBP29.8■■■□□ 2.36
VLDLR-201ENST00000382096 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
VLDLR-201ENST00000382096 LBX1P52954 281 aa29.79■■■□□ 2.36
VLDLR-201ENST00000382096 USP50Q70EL3 339 aaPredicted RBP29.78■■■□□ 2.36
VLDLR-201ENST00000382096 NIM1KQ8IY84 436 aa29.78■■■□□ 2.36
VLDLR-201ENST00000382096 MAP2K1Q02750 393 aaPredicted RBP29.77■■■□□ 2.36
VLDLR-201ENST00000382096 NLRP3Q96P20 1036 aa29.77■■■□□ 2.36
VLDLR-201ENST00000382096 VPS33BQ9H267 617 aa29.77■■■□□ 2.36
VLDLR-201ENST00000382096 TCERG1O14776 1098 aaKnown RBP29.76■■■□□ 2.35
VLDLR-201ENST00000382096 HSPA8P11142 646 aaKnown RBP29.76■■■□□ 2.35
VLDLR-201ENST00000382096 PDIA6Q15084 440 aa29.76■■■□□ 2.35
VLDLR-201ENST00000382096 SLC10A5Q5PT55 438 aa29.76■■■□□ 2.35
VLDLR-201ENST00000382096 ATP6V0A2Q9Y487 856 aa29.76■■■□□ 2.35
VLDLR-201ENST00000382096 PPIP5K2O43314 1243 aa29.75■■■□□ 2.35
VLDLR-201ENST00000382096 RIPK4P57078 832 aa29.75■■■□□ 2.35
VLDLR-201ENST00000382096 BABAM1Q9NWV8 329 aa29.75■■■□□ 2.35
VLDLR-201ENST00000382096 TSPYL4Q9UJ04 414 aa29.75■■■□□ 2.35
VLDLR-201ENST00000382096 UTP14AQ9BVJ6 771 aaKnown RBP29.74■■■□□ 2.35
VLDLR-201ENST00000382096 ABCC4O15439 1325 aa29.73■■■□□ 2.35
VLDLR-201ENST00000382096 TMPOP42166 694 aaKnown RBP29.73■■■□□ 2.35
VLDLR-201ENST00000382096 FMR1Q06787 632 aaKnown RBP eCLIP29.73■■■□□ 2.35
VLDLR-201ENST00000382096 AOC3Q16853 763 aa29.73■■■□□ 2.35
VLDLR-201ENST00000382096 TMX4Q9H1E5 349 aaPredicted RBP29.73■■■□□ 2.35
VLDLR-201ENST00000382096 TAF1P21675 1872 aa29.73■■■□□ 2.35
VLDLR-201ENST00000382096 RTFDC1Q9BY42 306 aaPredicted RBP29.72■■■□□ 2.35
VLDLR-201ENST00000382096 GPRC5DQ9NZD1 345 aa29.72■■■□□ 2.35
VLDLR-201ENST00000382096 LRRC37AA6NMS7 1700 aa29.71■■■□□ 2.35
VLDLR-201ENST00000382096 LMOD3Q0VAK6 560 aa29.71■■■□□ 2.35
VLDLR-201ENST00000382096 PROSER3Q2NL68 480 aa29.71■■■□□ 2.35
VLDLR-201ENST00000382096 CAPNS2Q96L46 248 aa29.71■■■□□ 2.35
VLDLR-201ENST00000382096 CST9Q5W186 159 aa29.7■■■□□ 2.35
VLDLR-201ENST00000382096 SUPT20HQ8NEM7 779 aa29.7■■■□□ 2.35
VLDLR-201ENST00000382096 ADARB2Q9NS39 739 aaKnown RBP29.7■■■□□ 2.35
VLDLR-201ENST00000382096 ZNRF3Q9ULT6 936 aa29.7■■■□□ 2.35
VLDLR-201ENST00000382096 TRAF5O00463 557 aa29.69■■■□□ 2.34
VLDLR-201ENST00000382096 EIF2S2P20042 333 aaKnown RBP29.69■■■□□ 2.34
VLDLR-201ENST00000382096 ECE1P42892 770 aa29.69■■■□□ 2.34
VLDLR-201ENST00000382096 DDX60Q8IY21 1712 aaKnown RBP29.68■■■□□ 2.34
VLDLR-201ENST00000382096 CXCL9Q07325 125 aa29.68■■■□□ 2.34
VLDLR-201ENST00000382096 TLL2Q9Y6L7 1015 aa29.68■■■□□ 2.34
VLDLR-201ENST00000382096 BBOX1O75936 387 aa29.67■■■□□ 2.34
VLDLR-201ENST00000382096 ANXA1P04083 346 aa29.67■■■□□ 2.34
VLDLR-201ENST00000382096 CDHR2Q9BYE9 1310 aa29.67■■■□□ 2.34
VLDLR-201ENST00000382096 DUOX1Q9NRD9 1551 aa29.66■■■□□ 2.34
VLDLR-201ENST00000382096 HSP90AB3PQ58FF7 597 aa29.66■■■□□ 2.34
VLDLR-201ENST00000382096 CYP4F22Q6NT55 531 aa29.66■■■□□ 2.34
VLDLR-201ENST00000382096 SP8Q8IXZ3 490 aa29.66■■■□□ 2.34
VLDLR-201ENST00000382096 DPP8Q6V1X1 898 aaPredicted RBP29.65■■■□□ 2.34
VLDLR-201ENST00000382096 PAXIP1Q6ZW49 1069 aaPredicted RBP29.65■■■□□ 2.34
VLDLR-201ENST00000382096 NLRP10Q86W26 655 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms