RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 GOLIM4O00461 696 aa17.44■□□□□ 0.38
TUSC3-201ENST00000382020 CEP135Q66GS9 1140 aa17.44■□□□□ 0.38
TUSC3-201ENST00000382020 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
TUSC3-201ENST00000382020 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 CCAR1Q8IX12 1150 aaKnown RBP17.43■□□□□ 0.38
TUSC3-201ENST00000382020 ARID5BQ14865 1188 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 RAPGEF4Q8WZA2 1011 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 CBX8Q9HC52 389 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 UNC13BO14795 1591 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 SKILP12757 684 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 TEX35Q5T0J7 233 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 Q6ZUG5 572 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 TPCN1Q9ULQ1 816 aa17.43■□□□□ 0.38
TUSC3-201ENST00000382020 RAD50Q92878 1312 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 SERPINC1P01008 464 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 CHGBP05060 677 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
TUSC3-201ENST00000382020 AOPEPQ8N6M6 819 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 ZMYM3Q14202 1370 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 TMC6Q7Z403 805 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 SCAND2PQ9GZW5 306 aaPredicted RBP17.42■□□□□ 0.38
TUSC3-201ENST00000382020 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
TUSC3-201ENST00000382020 MTMR6Q9Y217 621 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 ELF2Q15723 593 aa17.42■□□□□ 0.38
TUSC3-201ENST00000382020 NR1I2O75469 434 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 RXRAP19793 462 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 APOBRQ0VD83 1088 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
TUSC3-201ENST00000382020 FEZ1Q99689 392 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 NOL10Q9BSC4 688 aaKnown RBP17.41■□□□□ 0.38
TUSC3-201ENST00000382020 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
TUSC3-201ENST00000382020 HDAC5Q9UQL6 1122 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 SETD1BQ9UPS6 1966 aaKnown RBP17.41■□□□□ 0.38
TUSC3-201ENST00000382020 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
TUSC3-201ENST00000382020 CALCOCO1Q9P1Z2 691 aa17.41■□□□□ 0.38
TUSC3-201ENST00000382020 PROSER3Q2NL68 480 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
TUSC3-201ENST00000382020 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
TUSC3-201ENST00000382020 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
TUSC3-201ENST00000382020 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
TUSC3-201ENST00000382020 KIAA1524Q8TCG1 905 aa17.4■□□□□ 0.38
TUSC3-201ENST00000382020 PIK3R4Q99570 1358 aa17.39■□□□□ 0.38
TUSC3-201ENST00000382020 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
TUSC3-201ENST00000382020 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 ST7Q9NRC1 585 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 ZFYVE9O95405 1425 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 CFAP100Q494V2 611 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 ERC1Q8IUD2 1116 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 METP08581 1390 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
TUSC3-201ENST00000382020 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
TUSC3-201ENST00000382020 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
TUSC3-201ENST00000382020 NCBP1Q09161 790 aaKnown RBP17.38■□□□□ 0.37
TUSC3-201ENST00000382020 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
TUSC3-201ENST00000382020 A0A087WZG4 1122 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 CUL4AQ13619 759 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 COPS6Q7L5N1 327 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 ZBTB3Q9H5J0 574 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 SLC27A2O14975 620 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 CPLX3Q8WVH0 158 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
TUSC3-201ENST00000382020 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 MYOM2P54296 1465 aa17.37■□□□□ 0.37
TUSC3-201ENST00000382020 TULP4Q9NRJ4 1543 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 CCDC69A6NI79 296 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 TIMM10P62072 90 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
TUSC3-201ENST00000382020 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 SPHKAPQ2M3C7 1700 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 C10orf67Q8IYJ2 551 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 KIF18AQ8NI77 898 aa17.36■□□□□ 0.37
TUSC3-201ENST00000382020 KIF1BO60333 1816 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 KLHL10Q6JEL2 608 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
TUSC3-201ENST00000382020 CLEC17AQ6ZS10 378 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
TUSC3-201ENST00000382020 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
TUSC3-201ENST00000382020 TRDNQ13061 729 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 SUCLG2Q96I99 432 aa17.35■□□□□ 0.37
TUSC3-201ENST00000382020 NAT10Q9H0A0 1025 aaKnown RBP17.34■□□□□ 0.37
TUSC3-201ENST00000382020 ARGLU1Q9NWB6 273 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms