RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
RPAIN-202ENST00000381208 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
RPAIN-202ENST00000381208 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
RPAIN-202ENST00000381208 ZBTB3Q9H5J0 574 aa16.97■□□□□ 0.31
RPAIN-202ENST00000381208 SLX4Q8IY92 1834 aa16.97■□□□□ 0.31
RPAIN-202ENST00000381208 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
RPAIN-202ENST00000381208 CHL1O00533 1208 aa16.96■□□□□ 0.31
RPAIN-202ENST00000381208 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-202ENST00000381208 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.31
RPAIN-202ENST00000381208 HOXB7P09629 217 aa16.95■□□□□ 0.3
RPAIN-202ENST00000381208 GPTP24298 496 aa16.95■□□□□ 0.3
RPAIN-202ENST00000381208 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-202ENST00000381208 PDIA6Q15084 440 aa16.95■□□□□ 0.3
RPAIN-202ENST00000381208 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
RPAIN-202ENST00000381208 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
RPAIN-202ENST00000381208 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 IQCA1LA6NCM1 817 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 NUTM1Q86Y26 1132 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 DNAJC5GQ8N7S2 189 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
RPAIN-202ENST00000381208 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
RPAIN-202ENST00000381208 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 RBM17Q96I25 401 aaKnown RBP16.93■□□□□ 0.3
RPAIN-202ENST00000381208 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 PSMD1Q99460 953 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
RPAIN-202ENST00000381208 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
RPAIN-202ENST00000381208 NTSR2O95665 410 aa16.92■□□□□ 0.3
RPAIN-202ENST00000381208 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
RPAIN-202ENST00000381208 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
RPAIN-202ENST00000381208 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
RPAIN-202ENST00000381208 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
RPAIN-202ENST00000381208 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-202ENST00000381208 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
RPAIN-202ENST00000381208 NUP98P52948 1817 aa16.92■□□□□ 0.3
RPAIN-202ENST00000381208 POTECB2RU33 542 aa16.91■□□□□ 0.3
RPAIN-202ENST00000381208 SLC10A5Q5PT55 438 aa16.91■□□□□ 0.3
RPAIN-202ENST00000381208 KLRG1Q96E93 195 aa16.91■□□□□ 0.3
RPAIN-202ENST00000381208 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-202ENST00000381208 CFAP44Q96MT7 982 aa16.91■□□□□ 0.3
RPAIN-202ENST00000381208 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-202ENST00000381208 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
RPAIN-202ENST00000381208 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
RPAIN-202ENST00000381208 SYNE4Q8N205 404 aa16.9■□□□□ 0.3
RPAIN-202ENST00000381208 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
RPAIN-202ENST00000381208 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
RPAIN-202ENST00000381208 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-202ENST00000381208 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
RPAIN-202ENST00000381208 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
RPAIN-202ENST00000381208 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
RPAIN-202ENST00000381208 XAGE3Q8WTP9 111 aa16.89■□□□□ 0.29
RPAIN-202ENST00000381208 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
RPAIN-202ENST00000381208 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
RPAIN-202ENST00000381208 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-202ENST00000381208 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
RPAIN-202ENST00000381208 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
RPAIN-202ENST00000381208 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
RPAIN-202ENST00000381208 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
RPAIN-202ENST00000381208 FZD9O00144 591 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-202ENST00000381208 ANXA1P04083 346 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 LHX8Q68G74 356 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 NLRP10Q86W26 655 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 HYPKQ9NX55 129 aa16.87■□□□□ 0.29
RPAIN-202ENST00000381208 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 BBOX1O75936 387 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 GNAI1P63096 354 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 OLFM4Q6UX06 510 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 GPC2Q8N158 579 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 PLBD2Q8NHP8 589 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 CHPF2Q9P2E5 772 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
RPAIN-202ENST00000381208 EIF6P56537 245 aaKnown RBP16.85■□□□□ 0.29
RPAIN-202ENST00000381208 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
RPAIN-202ENST00000381208 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-202ENST00000381208 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
RPAIN-202ENST00000381208 TAF1DQ9H5J8 278 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-202ENST00000381208 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
RPAIN-202ENST00000381208 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
RPAIN-202ENST00000381208 APAF1O14727 1248 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 KRT24Q2M2I5 525 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 TMC4Q7Z404 712 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
RPAIN-202ENST00000381208 SCN4AP35499 1836 aa16.83■□□□□ 0.28
RPAIN-202ENST00000381208 HTRA3P83110 453 aa16.83■□□□□ 0.28
RPAIN-202ENST00000381208 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
RPAIN-202ENST00000381208 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
RPAIN-202ENST00000381208 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms