RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 HOXA10P31260 410 aaPredicted RBP19.03■□□□□ 0.64
SMS-201ENST00000379404 C3orf67Q6ZVT6 689 aa19.03■□□□□ 0.64
SMS-201ENST00000379404 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
SMS-201ENST00000379404 UTP14AQ9BVJ6 771 aaKnown RBP19.03■□□□□ 0.64
SMS-201ENST00000379404 ANKRD36CQ5JPF3 1778 aa19.03■□□□□ 0.64
SMS-201ENST00000379404 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
SMS-201ENST00000379404 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
SMS-201ENST00000379404 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
SMS-201ENST00000379404 TRIM28Q13263 835 aaKnown RBP19.01■□□□□ 0.63
SMS-201ENST00000379404 CCDC30Q5VVM6 783 aa19.01■□□□□ 0.63
SMS-201ENST00000379404 SYNE4Q8N205 404 aa19.01■□□□□ 0.63
SMS-201ENST00000379404 GPBP1L1Q9HC44 474 aaPredicted RBP19.01■□□□□ 0.63
SMS-201ENST00000379404 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
SMS-201ENST00000379404 ZNF521Q96K83 1311 aa19■□□□□ 0.63
SMS-201ENST00000379404 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
SMS-201ENST00000379404 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
SMS-201ENST00000379404 LMNB1P20700 586 aa19■□□□□ 0.63
SMS-201ENST00000379404 ALDH1B1P30837 517 aa19■□□□□ 0.63
SMS-201ENST00000379404 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
SMS-201ENST00000379404 CHMP4AQ9BY43 222 aa19■□□□□ 0.63
SMS-201ENST00000379404 CACNA1SQ13698 1873 aa18.99■□□□□ 0.63
SMS-201ENST00000379404 ZNF526Q8TF50 670 aaPredicted RBP18.99■□□□□ 0.63
SMS-201ENST00000379404 VAMP4O75379 141 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 C1QTNF8P60827 252 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 OLFM4Q6UX06 510 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 NLRP3Q96P20 1036 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 CRAMP1Q96RY5 1269 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 SNED1Q8TER0 1413 aa18.98■□□□□ 0.63
SMS-201ENST00000379404 CCDC88AQ3V6T2 1871 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 ATP5J2-PTCD1G3V325 749 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 KIF3CO14782 793 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 TRMT112Q9UI30 125 aaKnown RBP18.97■□□□□ 0.63
SMS-201ENST00000379404 SH3TC1Q8TE82 1336 aa18.97■□□□□ 0.63
SMS-201ENST00000379404 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
SMS-201ENST00000379404 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
SMS-201ENST00000379404 ZC3H4Q9UPT8 1303 aaKnown RBP18.96■□□□□ 0.63
SMS-201ENST00000379404 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
SMS-201ENST00000379404 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
SMS-201ENST00000379404 GOLGA2Q08379 1002 aa18.95■□□□□ 0.62
SMS-201ENST00000379404 CCDC93Q567U6 631 aa18.95■□□□□ 0.62
SMS-201ENST00000379404 G2E3Q7L622 706 aa18.95■□□□□ 0.62
SMS-201ENST00000379404 RPGRQ92834 1020 aaKnown RBP18.95■□□□□ 0.62
SMS-201ENST00000379404 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
SMS-201ENST00000379404 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
SMS-201ENST00000379404 SLC4A2P04920 1241 aa18.94■□□□□ 0.62
SMS-201ENST00000379404 SLC51AQ86UW1 340 aa18.94■□□□□ 0.62
SMS-201ENST00000379404 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
SMS-201ENST00000379404 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
SMS-201ENST00000379404 METTL22Q9BUU2 404 aaPredicted RBP18.94■□□□□ 0.62
SMS-201ENST00000379404 NMRK2Q9NPI5 230 aa18.94■□□□□ 0.62
SMS-201ENST00000379404 LAMB2P55268 1798 aa18.93■□□□□ 0.62
SMS-201ENST00000379404 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
SMS-201ENST00000379404 DICER1Q9UPY3 1922 aaKnown RBP18.93■□□□□ 0.62
SMS-201ENST00000379404 PI4KAP2A4QPH2 592 aa18.92■□□□□ 0.62
SMS-201ENST00000379404 FKBP4Q02790 459 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMS-201ENST00000379404 RTKN2Q8IZC4 609 aa18.92■□□□□ 0.62
SMS-201ENST00000379404 PI4KAP1Q8N8J0 262 aa18.92■□□□□ 0.62
SMS-201ENST00000379404 MYD88Q99836 296 aa18.92■□□□□ 0.62
SMS-201ENST00000379404 STK31Q9BXU1 1019 aa18.92■□□□□ 0.62
SMS-201ENST00000379404 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
SMS-201ENST00000379404 GLTPD2A6NH11 291 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
SMS-201ENST00000379404 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
SMS-201ENST00000379404 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 CCDC191Q8NCU4 936 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 MYH16Q9H6N6 1097 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 MAP3K2Q9Y2U5 619 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 ABCC4O15439 1325 aa18.91■□□□□ 0.62
SMS-201ENST00000379404 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
SMS-201ENST00000379404 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
SMS-201ENST00000379404 PSMD1Q99460 953 aa18.9■□□□□ 0.62
SMS-201ENST00000379404 POTECB2RU33 542 aa18.89■□□□□ 0.61
SMS-201ENST00000379404 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
SMS-201ENST00000379404 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 IRS4O14654 1257 aaPredicted RBP18.88■□□□□ 0.61
SMS-201ENST00000379404 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
SMS-201ENST00000379404 BBOX1O75936 387 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 PCCAP05165 728 aaPredicted RBP18.88■□□□□ 0.61
SMS-201ENST00000379404 FLIIQ13045 1269 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 RTL5Q5HYW3 569 aaPredicted RBP18.88■□□□□ 0.61
SMS-201ENST00000379404 RRAGCQ9HB90 399 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
SMS-201ENST00000379404 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
SMS-201ENST00000379404 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
SMS-201ENST00000379404 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
SMS-201ENST00000379404 TAF1P21675 1872 aa18.86■□□□□ 0.61
SMS-201ENST00000379404 GRAPQ13588 217 aa18.86■□□□□ 0.61
SMS-201ENST00000379404 DDX46Q7L014 1031 aaKnown RBP18.86■□□□□ 0.61
SMS-201ENST00000379404 SP8Q8IXZ3 490 aa18.86■□□□□ 0.61
SMS-201ENST00000379404 GRAPLQ8TC17 118 aaPredicted RBP18.86■□□□□ 0.61
SMS-201ENST00000379404 TOMM70O94826 608 aa18.85■□□□□ 0.61
SMS-201ENST00000379404 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
SMS-201ENST00000379404 SLFN5Q08AF3 891 aa18.85■□□□□ 0.61
SMS-201ENST00000379404 TRMT2AQ8IZ69 625 aaKnown RBP18.85■□□□□ 0.61
SMS-201ENST00000379404 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
SMS-201ENST00000379404 COL4A1P02462 1669 aa18.85■□□□□ 0.61
SMS-201ENST00000379404 NEURL1BA8MQ27 555 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms