RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 TTC14Q96N46 770 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 EXOC1Q9NV70 894 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
PTCHD1-201ENST00000379361 LDHCP07864 332 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 GSTA5Q7RTV2 222 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 GSDMBQ8TAX9 411 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 CCDC63Q8NA47 563 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
PTCHD1-201ENST00000379361 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 HSPA4P34932 840 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 RFC4P35249 363 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 STX1AQ16623 288 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 FAM184BQ9ULE4 1060 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
PTCHD1-201ENST00000379361 SLC8A3P57103 927 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 CFAP157Q5JU67 520 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 KAT14Q9H8E8 782 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 KIF3CO14782 793 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 CAMK4Q16566 473 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 ZNF213O14771 459 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.8□□□□□ -0.36
PTCHD1-201ENST00000379361 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 LPXNO60711 386 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 STK10O94804 968 aaKnown RBP12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 GIPC1O14908 333 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 MFSD6Q6ZSS7 791 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 EEF2P13639 858 aaKnown RBP12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 UBA7P41226 1012 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 PAIP2Q9BPZ3 127 aaKnown RBP12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
PTCHD1-201ENST00000379361 CEP128Q6ZU80 1094 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 MAP7Q14244 749 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 LMBR1Q8WVP7 490 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 TSPY2A6NKD2 308 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 NEMFO60524 1076 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 POLD1P28340 1107 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 TSPY3P0CV98 308 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 TSPY8P0CW00 308 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 STIM2Q9P246 746 aa12.78□□□□□ -0.36
PTCHD1-201ENST00000379361 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 ATP6V1E1P36543 226 aa12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 CGNQ9P2M7 1197 aaKnown RBP12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 C6orf50Q9HD87 102 aa12.77□□□□□ -0.36
PTCHD1-201ENST00000379361 GABPAQ06546 454 aa12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 RAB3IPQ96QF0 476 aaPredicted RBP12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 FAM13AO94988 1023 aa12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 AMOTQ4VCS5 1084 aa12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.37
PTCHD1-201ENST00000379361 CIB2O75838 187 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 BMP15O95972 392 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 PPP1R42Q7Z4L9 355 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 CCDC114Q96M63 670 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 DAPK1P53355 1430 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 WDR66Q8TBY9 1149 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms