RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 PPP4R3AQ6IN85 833 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 KIAA0754O94854 1291 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 MCM5P33992 734 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 KAT14Q9H8E8 782 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 MSH6P52701 1360 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 GRM8O00222 908 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 RFC4P35249 363 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 PDE1AP54750 535 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 TESK2Q96S53 571 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 GBP3Q9H0R5 595 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 ATP10BO94823 1461 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 KSR2Q6VAB6 950 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
CNTNAP3-204ENST00000377656 PPIP5K1Q6PFW1 1433 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 BRF1Q92994 677 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 CCDC102AQ96A19 550 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 TRIM21P19474 475 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 UBA7P41226 1012 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 NBPF5PQ86XG9 351 aaPredicted RBP20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 SLC39A6Q13433 755 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 KIF4BQ2VIQ3 1234 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 EHMT1Q9H9B1 1298 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
CNTNAP3-204ENST00000377656 A2MP01023 1474 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 ATP2B3Q16720 1220 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 CALML4Q96GE6 196 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 BIN1O00499 593 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 WDHD1O75717 1129 aaPredicted RBP20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 IDEP14735 1019 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 AMPD3Q01432 767 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 SLC26A6Q9BXS9 759 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 CRNKL1Q9BZJ0 848 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 HLA-DOAP06340 250 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 FEZ1Q99689 392 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 VAT1LQ9HCJ6 419 aa20.54■□□□□ 0.88
CNTNAP3-204ENST00000377656 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 UBE2HP62256 183 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 SCLT1Q96NL6 688 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 ZSCAN16Q9H4T2 348 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 URI1O94763 535 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 ZNF165P49910 485 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 C8orf34Q49A92 452 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 PYM1Q9BRP8 204 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 CABP5Q9NP86 173 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 STX1AQ16623 288 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 PDCL2Q8N4E4 241 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 CRACR2AQ9BSW2 395 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 TMCO3Q6UWJ1 677 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 NUP88Q99567 741 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
CNTNAP3-204ENST00000377656 NEMFO60524 1076 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 WDR78Q5VTH9 848 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 CCDC102BQ68D86 513 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 GOLGA6L7A0A1B0GV03 622 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 WDR62O43379 1518 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 YEATS4O95619 227 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 CAVIN2O95810 425 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 IL15P40933 162 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 CPLX3Q8WVH0 158 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 STX8Q9UNK0 236 aa20.52■□□□□ 0.88
CNTNAP3-204ENST00000377656 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.87
CNTNAP3-204ENST00000377656 PPFIA3O75145 1194 aa20.52■□□□□ 0.87
CNTNAP3-204ENST00000377656 KANK3Q6NY19 840 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 USO1O60763 962 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 MTIF2P46199 727 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 TDRD12Q587J7 1177 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 GSDMDP57764 484 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 WTAPQ15007 396 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 NEBLO76041 1014 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 ANAPC15P60006 121 aa20.51■□□□□ 0.87
CNTNAP3-204ENST00000377656 PIK3C2GO75747 1445 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 DNAI2Q9GZS0 605 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 KLHL40Q2TBA0 621 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 ESYT1Q9BSJ8 1104 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 ASXL2Q76L83 1435 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 EIF2AK4Q9P2K8 1649 aaKnown RBP20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 GSTO1P78417 241 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 KRT23Q9C075 422 aa20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 RBM8AQ9Y5S9 174 aaKnown RBP20.5■□□□□ 0.87
CNTNAP3-204ENST00000377656 PRKCSHP14314 528 aaPredicted RBP20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 IBSPP21815 317 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms