RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 KIF5BP33176 963 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
MDC1-201ENST00000376406 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
MDC1-201ENST00000376406 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
MDC1-201ENST00000376406 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
MDC1-201ENST00000376406 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
MDC1-201ENST00000376406 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
MDC1-201ENST00000376406 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
MDC1-201ENST00000376406 MCM5P33992 734 aa12.74□□□□□ -0.37
MDC1-201ENST00000376406 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 SLC12A7Q9Y666 1083 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
MDC1-201ENST00000376406 UBE2HP62256 183 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ZNF397Q8NF99 534 aaPredicted RBP12.73□□□□□ -0.37
MDC1-201ENST00000376406 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ZSCAN12O43309 604 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
MDC1-201ENST00000376406 SDSP20132 328 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ANAPC15P60006 121 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.374e-8■■□□□ 11.6
MDC1-201ENST00000376406 INSRP06213 1382 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 ANKRD44Q8N8A2 993 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 KDM5CP41229 1560 aa12.73□□□□□ -0.37
MDC1-201ENST00000376406 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
MDC1-201ENST00000376406 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 NEMFO60524 1076 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 PLCG2P16885 1265 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 STX1AQ16623 288 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
MDC1-201ENST00000376406 SFPQP23246 707 aaKnown RBP eCLIP12.72□□□□□ -0.37
MDC1-201ENST00000376406 LDHAL6AQ6ZMR3 332 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
MDC1-201ENST00000376406 EYA3Q99504 573 aa12.72□□□□□ -0.37
MDC1-201ENST00000376406 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
MDC1-201ENST00000376406 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
MDC1-201ENST00000376406 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
MDC1-201ENST00000376406 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
MDC1-201ENST00000376406 FEZ1Q99689 392 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
MDC1-201ENST00000376406 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.38
MDC1-201ENST00000376406 ZHX3Q9H4I2 956 aa12.71□□□□□ -0.38
MDC1-201ENST00000376406 PAF1Q8N7H5 531 aa12.71□□□□□ -0.38
MDC1-201ENST00000376406 NEK1Q96PY6 1258 aa12.71□□□□□ -0.38
MDC1-201ENST00000376406 CASQ1P31415 396 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
MDC1-201ENST00000376406 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
MDC1-201ENST00000376406 ABCA8O94911 1581 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 CAVIN2O95810 425 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 PDE1AP54750 535 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 TMX3Q96JJ7 454 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 KIF20AO95235 890 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 MEIS3Q99687 375 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
MDC1-201ENST00000376406 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
MDC1-201ENST00000376406 GSDMDP57764 484 aa12.7□□□□□ -0.38
MDC1-201ENST00000376406 H0YHG0 523 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 GOLIM4O00461 696 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 KDM6BO15054 1643 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 KIF18AQ8NI77 898 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 STK32BQ9NY57 414 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 IP6K1Q92551 441 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 HOOK2Q96ED9 719 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
MDC1-201ENST00000376406 EIF4A2Q14240 407 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms