RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
LSM2-208ENST00000375661 HLFQ16534 295 aa16.04■□□□□ 0.16
LSM2-208ENST00000375661 DEFB115Q30KQ5 88 aa16.04■□□□□ 0.16
LSM2-208ENST00000375661 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
LSM2-208ENST00000375661 PNISRQ8TF01 805 aaKnown RBP16.04■□□□□ 0.16
LSM2-208ENST00000375661 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
LSM2-208ENST00000375661 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
LSM2-208ENST00000375661 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
LSM2-208ENST00000375661 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
LSM2-208ENST00000375661 THSD7BQ9C0I4 1608 aa16.03■□□□□ 0.16
LSM2-208ENST00000375661 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
LSM2-208ENST00000375661 HOXA10P31260 410 aaPredicted RBP16.02■□□□□ 0.16
LSM2-208ENST00000375661 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
LSM2-208ENST00000375661 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
LSM2-208ENST00000375661 LTBP1Q14766 1721 aa16.02■□□□□ 0.15
LSM2-208ENST00000375661 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
LSM2-208ENST00000375661 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
LSM2-208ENST00000375661 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
LSM2-208ENST00000375661 COL4A5P29400 1685 aa16■□□□□ 0.15
LSM2-208ENST00000375661 NEFMP07197 916 aa16■□□□□ 0.15
LSM2-208ENST00000375661 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
LSM2-208ENST00000375661 KIF6Q6ZMV9 814 aa16■□□□□ 0.15
LSM2-208ENST00000375661 RPGRQ92834 1020 aaKnown RBP16■□□□□ 0.15
LSM2-208ENST00000375661 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
LSM2-208ENST00000375661 LBX1P52954 281 aa15.99■□□□□ 0.15
LSM2-208ENST00000375661 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
LSM2-208ENST00000375661 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
LSM2-208ENST00000375661 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
LSM2-208ENST00000375661 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
LSM2-208ENST00000375661 HSPA8P11142 646 aaKnown RBP15.98■□□□□ 0.15
LSM2-208ENST00000375661 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
LSM2-208ENST00000375661 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
LSM2-208ENST00000375661 ECE1P42892 770 aa15.97■□□□□ 0.15
LSM2-208ENST00000375661 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
LSM2-208ENST00000375661 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
LSM2-208ENST00000375661 MIS18AQ9NYP9 233 aa15.97■□□□□ 0.15
LSM2-208ENST00000375661 GJA3Q9Y6H8 435 aa15.97■□□□□ 0.15
LSM2-208ENST00000375661 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 ANKRD36CQ5JPF3 1778 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 SCNN1DP51172 638 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
LSM2-208ENST00000375661 SUSD4Q5VX71 490 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
LSM2-208ENST00000375661 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 NGEFQ8N5V2 710 aa15.96■□□□□ 0.15
LSM2-208ENST00000375661 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
LSM2-208ENST00000375661 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
LSM2-208ENST00000375661 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
LSM2-208ENST00000375661 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
LSM2-208ENST00000375661 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
LSM2-208ENST00000375661 MRS2Q9HD23 443 aa15.95■□□□□ 0.14
LSM2-208ENST00000375661 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
LSM2-208ENST00000375661 LAMB2P55268 1798 aa15.95■□□□□ 0.14
LSM2-208ENST00000375661 NTSR2O95665 410 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 GPTP24298 496 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 EPS15P42566 896 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 MIER1Q8N108 512 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 SUPT20HQ8NEM7 779 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 CAPNS2Q96L46 248 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 BEGAINQ9BUH8 593 aa15.94■□□□□ 0.14
LSM2-208ENST00000375661 MYL6BP14649 208 aa15.93■□□□□ 0.14
LSM2-208ENST00000375661 ABHD8Q96I13 439 aa15.93■□□□□ 0.14
LSM2-208ENST00000375661 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
LSM2-208ENST00000375661 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
LSM2-208ENST00000375661 ADARB2Q9NS39 739 aaKnown RBP15.93■□□□□ 0.14
LSM2-208ENST00000375661 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
LSM2-208ENST00000375661 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 SLC10A5Q5PT55 438 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 GPRC5DQ9NZD1 345 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 TLL2Q9Y6L7 1015 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 CDHR2Q9BYE9 1310 aa15.92■□□□□ 0.14
LSM2-208ENST00000375661 MAP2K2P36507 400 aa15.91■□□□□ 0.14
LSM2-208ENST00000375661 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
LSM2-208ENST00000375661 CST9Q5W186 159 aa15.91■□□□□ 0.14
LSM2-208ENST00000375661 GPR101Q96P66 508 aaPredicted RBP15.91■□□□□ 0.14
LSM2-208ENST00000375661 RTFDC1Q9BY42 306 aaPredicted RBP15.91■□□□□ 0.14
LSM2-208ENST00000375661 ZNRF3Q9ULT6 936 aa15.91■□□□□ 0.14
LSM2-208ENST00000375661 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
LSM2-208ENST00000375661 HHIPL1Q96JK4 782 aa15.9■□□□□ 0.14
LSM2-208ENST00000375661 CA12O43570 354 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 BBOX1O75936 387 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 AOC3Q16853 763 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 CYP4F22Q6NT55 531 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
LSM2-208ENST00000375661 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.13
LSM2-208ENST00000375661 BABAM1Q9NWV8 329 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 PGAP2Q9UHJ9 254 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
LSM2-208ENST00000375661 TRAF5O00463 557 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.13
LSM2-208ENST00000375661 CXCL9Q07325 125 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 HSP90AB3PQ58FF7 597 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 SP8Q8IXZ3 490 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms