RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
SDHB-201ENST00000375499 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.83
SDHB-201ENST00000375499 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
SDHB-201ENST00000375499 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
SDHB-201ENST00000375499 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
SDHB-201ENST00000375499 STYK1Q6J9G0 422 aa20.26■□□□□ 0.83
SDHB-201ENST00000375499 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
SDHB-201ENST00000375499 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
SDHB-201ENST00000375499 MASTLQ96GX5 879 aa20.26■□□□□ 0.83
SDHB-201ENST00000375499 C21orf2O43822 256 aa20.25■□□□□ 0.83
SDHB-201ENST00000375499 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
SDHB-201ENST00000375499 LAMB2P55268 1798 aa20.24■□□□□ 0.83
SDHB-201ENST00000375499 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
SDHB-201ENST00000375499 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
SDHB-201ENST00000375499 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
SDHB-201ENST00000375499 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
SDHB-201ENST00000375499 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
SDHB-201ENST00000375499 CAPN15O75808 1086 aa20.23■□□□□ 0.83
SDHB-201ENST00000375499 NPR1P16066 1061 aa20.23■□□□□ 0.83
SDHB-201ENST00000375499 CNKSR1Q969H4 720 aa20.23■□□□□ 0.83
SDHB-201ENST00000375499 ZNF428Q96B54 188 aa20.23■□□□□ 0.83
SDHB-201ENST00000375499 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
SDHB-201ENST00000375499 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
SDHB-201ENST00000375499 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
SDHB-201ENST00000375499 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
SDHB-201ENST00000375499 OLFM4Q6UX06 510 aa20.22■□□□□ 0.83
SDHB-201ENST00000375499 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
SDHB-201ENST00000375499 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
SDHB-201ENST00000375499 CRY2Q49AN0 593 aa20.21■□□□□ 0.83
SDHB-201ENST00000375499 SYNE4Q8N205 404 aa20.21■□□□□ 0.83
SDHB-201ENST00000375499 C7orf43Q8WVR3 580 aa20.21■□□□□ 0.83
SDHB-201ENST00000375499 PCNTO95613 3336 aa20.21■□□□□ 0.83
SDHB-201ENST00000375499 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
SDHB-201ENST00000375499 POTECB2RU33 542 aa20.2■□□□□ 0.82
SDHB-201ENST00000375499 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
SDHB-201ENST00000375499 PARP10Q53GL7 1025 aa20.2■□□□□ 0.82
SDHB-201ENST00000375499 NLRP10Q86W26 655 aa20.2■□□□□ 0.82
SDHB-201ENST00000375499 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
SDHB-201ENST00000375499 CREBZFQ9NS37 354 aa20.2■□□□□ 0.82
SDHB-201ENST00000375499 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
SDHB-201ENST00000375499 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
SDHB-201ENST00000375499 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
SDHB-201ENST00000375499 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 ANKRD13DQ6ZTN6 518 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 PPP1R42Q7Z4L9 355 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 UTP14AQ9BVJ6 771 aaKnown RBP20.18■□□□□ 0.82
SDHB-201ENST00000375499 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 IL16Q14005 1332 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
SDHB-201ENST00000375499 SOGA3Q5TF21 947 aa20.17■□□□□ 0.82
SDHB-201ENST00000375499 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
SDHB-201ENST00000375499 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
SDHB-201ENST00000375499 SPINK5Q9NQ38 1064 aaPredicted RBP20.17■□□□□ 0.82
SDHB-201ENST00000375499 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
SDHB-201ENST00000375499 TAF1P21675 1872 aa20.16■□□□□ 0.82
SDHB-201ENST00000375499 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
SDHB-201ENST00000375499 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
SDHB-201ENST00000375499 HCLS1P14317 486 aaPredicted RBP20.15■□□□□ 0.82
SDHB-201ENST00000375499 TAOK3Q9H2K8 898 aa20.15■□□□□ 0.82
SDHB-201ENST00000375499 COL4A1P02462 1669 aa20.14■□□□□ 0.81
SDHB-201ENST00000375499 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
SDHB-201ENST00000375499 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
SDHB-201ENST00000375499 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.81
SDHB-201ENST00000375499 IQCA1LA6NCM1 817 aa20.13■□□□□ 0.81
SDHB-201ENST00000375499 TWISTNBQ3B726 338 aaPredicted RBP20.13■□□□□ 0.81
SDHB-201ENST00000375499 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
SDHB-201ENST00000375499 RPGRQ92834 1020 aaKnown RBP20.13■□□□□ 0.81
SDHB-201ENST00000375499 TRMT112Q9UI30 125 aaKnown RBP20.13■□□□□ 0.81
SDHB-201ENST00000375499 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
SDHB-201ENST00000375499 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
SDHB-201ENST00000375499 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
SDHB-201ENST00000375499 PRDM10Q9NQV6 1147 aa20.12■□□□□ 0.81
SDHB-201ENST00000375499 SH3TC1Q8TE82 1336 aa20.11■□□□□ 0.81
SDHB-201ENST00000375499 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
SDHB-201ENST00000375499 G2E3Q7L622 706 aa20.11■□□□□ 0.81
SDHB-201ENST00000375499 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
SDHB-201ENST00000375499 NLRP3Q96P20 1036 aa20.11■□□□□ 0.81
SDHB-201ENST00000375499 COL4A5P29400 1685 aa20.1■□□□□ 0.81
SDHB-201ENST00000375499 ABCC4O15439 1325 aa20.1■□□□□ 0.81
SDHB-201ENST00000375499 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
SDHB-201ENST00000375499 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
SDHB-201ENST00000375499 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
SDHB-201ENST00000375499 ZNF277Q9NRM2 450 aaPredicted RBP20.1■□□□□ 0.81
SDHB-201ENST00000375499 FKBP4Q02790 459 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDHB-201ENST00000375499 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
SDHB-201ENST00000375499 LDHDQ86WU2 507 aa20.09■□□□□ 0.81
SDHB-201ENST00000375499 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
SDHB-201ENST00000375499 MYD88Q99836 296 aa20.09■□□□□ 0.81
SDHB-201ENST00000375499 PPEF1O14829 653 aaPredicted RBP20.08■□□□□ 0.81
SDHB-201ENST00000375499 EXOSC9Q06265 439 aaKnown RBP20.08■□□□□ 0.81
SDHB-201ENST00000375499 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.81
SDHB-201ENST00000375499 L3MBTL3Q96JM7 780 aaPredicted RBP20.08■□□□□ 0.81
SDHB-201ENST00000375499 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
SDHB-201ENST00000375499 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
SDHB-201ENST00000375499 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
SDHB-201ENST00000375499 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
SDHB-201ENST00000375499 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
SDHB-201ENST00000375499 VAMP4O75379 141 aa20.06■□□□□ 0.8
SDHB-201ENST00000375499 CTCFP49711 727 aaPredicted RBP20.06■□□□□ 0.8
SDHB-201ENST00000375499 AIDAQ96BJ3 306 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms