RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 FAM107BQ9H098 131 aa16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 ATP2C2O75185 946 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 GJC1P36383 396 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 PHF8Q9UPP1 1060 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
NOTCH4-201ENST00000375023 GRIN2BQ13224 1484 aa16.96■□□□□ 0.3
NOTCH4-201ENST00000375023 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 FLIIQ13045 1269 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 METAP2P50579 478 aaKnown RBP eCLIP16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 HOOK3Q86VS8 718 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 CHST3Q7LGC8 479 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 CALML4Q96GE6 196 aa16.95■□□□□ 0.3
NOTCH4-201ENST00000375023 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 TRIM27P14373 513 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 VPS36Q86VN1 386 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 TMEM110-MUSTN1A8MSY1 372 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 LMAN1P49257 510 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 CWC25Q9NXE8 425 aaPredicted RBP16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
NOTCH4-201ENST00000375023 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 DAPK1P53355 1430 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 CAPN15O75808 1086 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 MAATS1Q7Z4T9 603 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
NOTCH4-201ENST00000375023 ZSCAN12O43309 604 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 ARID5AQ03989 594 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 YEATS4O95619 227 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 BIRC2Q13490 618 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 SHTN1A0MZ66 631 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 STK25O00506 426 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 PTGS1P23219 599 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 PAIP2Q9BPZ3 127 aaKnown RBP16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
NOTCH4-201ENST00000375023 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 ADCY5O95622 1261 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 USO1O60763 962 aaKnown RBP16.91■□□□□ 0.3
NOTCH4-201ENST00000375023 CEP63Q96MT8 703 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 SCAND2PQ9GZW5 306 aaPredicted RBP16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 RNF41Q9H4P4 317 aaPredicted RBP16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 MARCKSP29966 332 aaPredicted RBP16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 EVI5LQ96CN4 794 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 PLIN2Q99541 437 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 SYNCQ9H7C4 482 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 EHMT1Q9H9B1 1298 aa16.9■□□□□ 0.3
NOTCH4-201ENST00000375023 CYP7A1P22680 504 aa16.89■□□□□ 0.3
NOTCH4-201ENST00000375023 CALM1P0DP23 149 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 CALM2P0DP24 149 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 CALM3P0DP25 149 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 UBA7P41226 1012 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 PDE4BQ07343 736 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 STX6O43752 255 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms