RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 NPHP3Q7Z494 1330 aa22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 HOXB7P09629 217 aa22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 RBM27Q9P2N5 1060 aaKnown RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 SSRP1Q08945 709 aaKnown RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 ARHGEF5Q12774 1597 aa22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 HCLS1P14317 486 aaPredicted RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 SNRKQ9NRH2 765 aa22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 TOP1P11387 765 aaKnown RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
TGFBR1-201ENST00000374990 CNNM3Q8NE01 707 aa22.68■■□□□ 1.22
TGFBR1-201ENST00000374990 CHMLP26374 656 aa22.68■■□□□ 1.22
TGFBR1-201ENST00000374990 MCMDC2Q4G0Z9 681 aa22.68■■□□□ 1.22
TGFBR1-201ENST00000374990 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
TGFBR1-201ENST00000374990 EIF5P55010 431 aaKnown RBP22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 IQCEQ6IPM2 695 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 CDC5LQ99459 802 aaKnown RBP22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 LMBR1LQ6UX01 489 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 MKNK2Q9HBH9 465 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 RAD50Q92878 1312 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 GPTP24298 496 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 TANGO6Q9C0B7 1094 aa22.67■■□□□ 1.22
TGFBR1-201ENST00000374990 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
TGFBR1-201ENST00000374990 F13A1P00488 732 aa22.66■■□□□ 1.22
TGFBR1-201ENST00000374990 RANBP6O60518 1105 aaKnown RBP22.66■■□□□ 1.22
TGFBR1-201ENST00000374990 SYCP1Q15431 976 aa22.66■■□□□ 1.22
TGFBR1-201ENST00000374990 CCDC181Q5TID7 509 aa22.66■■□□□ 1.22
TGFBR1-201ENST00000374990 ZMYM3Q14202 1370 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 LEKR1Q6ZMV7 388 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 USP5P45974 858 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 NECAB1Q8N987 351 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 FAM200AQ8TCP9 573 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 CATIPQ7Z7H3 387 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 IP6K1Q92551 441 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 ZHX3Q9H4I2 956 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 RDXP35241 583 aaKnown RBP22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 TMEM67Q5HYA8 995 aa22.65■■□□□ 1.22
TGFBR1-201ENST00000374990 ZCRB1Q8TBF4 217 aaKnown RBP22.64■■□□□ 1.22
TGFBR1-201ENST00000374990 ZPR1O75312 459 aa22.64■■□□□ 1.22
TGFBR1-201ENST00000374990 HS1BP3Q53T59 392 aa22.64■■□□□ 1.22
TGFBR1-201ENST00000374990 USP48Q86UV5 1035 aa22.64■■□□□ 1.22
TGFBR1-201ENST00000374990 CHRNA2Q15822 529 aa22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 METAP2P50579 478 aaKnown RBP eCLIP22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 AXDND1Q5T1B0 1012 aaPredicted RBP22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 SSBP05455 408 aaKnown RBP eCLIP22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 TNNT1P13805 278 aa22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 DZIP1Q86YF9 867 aaKnown RBP22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 DDX21Q9NR30 783 aaKnown RBP eCLIP22.64■■□□□ 1.21
TGFBR1-201ENST00000374990 CCDC102BQ68D86 513 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 KANK3Q6NY19 840 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 CCDC82Q8N4S0 544 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 GBP3Q9H0R5 595 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 HOXC9P31274 260 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 PYM1Q9BRP8 204 aaKnown RBP22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 GCP02774 474 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 HAND2P61296 217 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 GIMAP6Q6P9H5 292 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 KCNG4Q8TDN1 519 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 RAB34Q9BZG1 259 aa22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 SEC63Q9UGP8 760 aaKnown RBP22.63■■□□□ 1.21
TGFBR1-201ENST00000374990 ATP2B3Q16720 1220 aa22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 POLR3DP05423 398 aaPredicted RBP22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 MFSD6Q6ZSS7 791 aa22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 MICU3Q86XE3 530 aa22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 TMTC2Q8N394 836 aa22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 ZNF397Q8NF99 534 aaPredicted RBP22.62■■□□□ 1.21
TGFBR1-201ENST00000374990 KLHL10Q6JEL2 608 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 TMCO3Q6UWJ1 677 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 ZNF444Q8N0Y2 327 aaPredicted RBP22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 CNPY2Q9Y2B0 182 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 KLF18A0A0U1RQI7 1052 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 ERLIN2O94905 339 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 CCDC194A0A1B0GVG4 234 aa22.61■■□□□ 1.21
TGFBR1-201ENST00000374990 PIBF1Q8WXW3 757 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 AOX1Q06278 1338 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 ZFYVE27Q5T4F4 411 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 TCEANC2Q96MN5 208 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 PA2G4Q9UQ80 394 aaKnown RBP22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 LDHCP07864 332 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 KIF5BP33176 963 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 PDCL3Q9H2J4 239 aa22.6■■□□□ 1.21
TGFBR1-201ENST00000374990 GOLGA6L9A6NEM1 432 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 AK2P54819 239 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 NMIQ13287 307 aaPredicted RBP22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 PANK2Q9BZ23 570 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 ADGBQ8N7X0 1667 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 KIF5CO60282 957 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 KIAA1328Q86T90 577 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 ZSCAN29Q8IWY8 852 aaPredicted RBP22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 MSH6P52701 1360 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 KIF24Q5T7B8 1368 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 C19orf44Q9H6X5 657 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
TGFBR1-201ENST00000374990 BMP15O95972 392 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms