RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
COL11A2-203ENST00000374708 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 TMCO5BA8MYB1 307 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 URI1O94763 535 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-203ENST00000374708 HAND2P61296 217 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 TRAF1Q13077 416 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 KANK3Q6NY19 840 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 SETDB2Q96T68 719 aa17.13■□□□□ 0.33
COL11A2-203ENST00000374708 NF2P35240 595 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 KIF18AQ8NI77 898 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 DDX19AQ9NUU7 478 aaKnown RBP17.12■□□□□ 0.33
COL11A2-203ENST00000374708 MSH6P52701 1360 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 GJB2P29033 226 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 CKAP2LQ8IYA6 745 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 NEK1Q96PY6 1258 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
COL11A2-203ENST00000374708 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
COL11A2-203ENST00000374708 SMC1AQ14683 1233 aaKnown RBP17.11■□□□□ 0.33
COL11A2-203ENST00000374708 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL11A2-203ENST00000374708 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
COL11A2-203ENST00000374708 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 NSD2O96028 1365 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 VTI1AQ96AJ9 217 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
COL11A2-203ENST00000374708 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 IDI1Q13907 227 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 KRT23Q9C075 422 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 STX1AQ16623 288 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 STX6O43752 255 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
COL11A2-203ENST00000374708 WTAPQ15007 396 aa17.1■□□□□ 0.33
COL11A2-203ENST00000374708 LARP6Q9BRS8 491 aaKnown RBP17.1■□□□□ 0.33
COL11A2-203ENST00000374708 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
COL11A2-203ENST00000374708 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
COL11A2-203ENST00000374708 ZCRB1Q8TBF4 217 aaKnown RBP17.09■□□□□ 0.33
COL11A2-203ENST00000374708 HOMER2Q9NSB8 354 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-203ENST00000374708 PSMD1Q99460 953 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 TSNARE1Q96NA8 513 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 MCM5P33992 734 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 ACEP12821 1306 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 CYP7A1P22680 504 aa17.09■□□□□ 0.33
COL11A2-203ENST00000374708 GIGYF2Q6Y7W6 1299 aaKnown RBP17.09■□□□□ 0.33
COL11A2-203ENST00000374708 BIN1O00499 593 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 ACTN2P35609 894 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 LMAN1P49257 510 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 PANK2Q9BZ23 570 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 NCOA1Q15788 1441 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 TOM1O60784 492 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 GRM1Q13255 1194 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 USP37Q86T82 979 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 MMRN2Q9H8L6 949 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.33
COL11A2-203ENST00000374708 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
COL11A2-203ENST00000374708 SPECC1Q5M775 1068 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 RMND1Q9NWS8 449 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 ESPNB1AK53 854 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 IFIT1BQ5T764 474 aaKnown RBP17.08■□□□□ 0.32
COL11A2-203ENST00000374708 RAB11FIP4Q86YS3 637 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
COL11A2-203ENST00000374708 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL11A2-203ENST00000374708 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
COL11A2-203ENST00000374708 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
COL11A2-203ENST00000374708 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 TMX1Q9H3N1 280 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 NOS1P29475 1434 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 GSDMDP57764 484 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 SLC4A4Q9Y6R1 1079 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 TRIM27P14373 513 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 LRRC45Q96CN5 670 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 DENND4BO75064 1496 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-203ENST00000374708 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
COL11A2-203ENST00000374708 NEMFO60524 1076 aa17.07■□□□□ 0.32
COL11A2-203ENST00000374708 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms