RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 PPLO60437 1756 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 RASSF8Q8NHQ8 419 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 NRDCO43847 1150 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 ME1P48163 572 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
CLIC4-201ENST00000374379 BRF1Q92994 677 aa16.07■□□□□ 0.16
CLIC4-201ENST00000374379 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
CLIC4-201ENST00000374379 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
CLIC4-201ENST00000374379 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
CLIC4-201ENST00000374379 CD163L1Q9NR16 1453 aa16.06■□□□□ 0.16
CLIC4-201ENST00000374379 PREX1Q8TCU6 1659 aa16.06■□□□□ 0.16
CLIC4-201ENST00000374379 GCKRQ14397 625 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 CKAP2LQ8IYA6 745 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
CLIC4-201ENST00000374379 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 KRT32Q14532 448 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 SGSM2O43147 1006 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 HOXB7P09629 217 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLIC4-201ENST00000374379 PHKG2P15735 406 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 ANAPC15P60006 121 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 ZNF592Q92610 1267 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
CLIC4-201ENST00000374379 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
CLIC4-201ENST00000374379 ERICH2A1L162 156 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
CLIC4-201ENST00000374379 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 MED14O60244 1454 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
CLIC4-201ENST00000374379 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
CLIC4-201ENST00000374379 RAD21O60216 631 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
CLIC4-201ENST00000374379 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 STK38Q15208 465 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-201ENST00000374379 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-201ENST00000374379 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-201ENST00000374379 MYOM1P52179 1685 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 G3V3G9 751 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
CLIC4-201ENST00000374379 USP25Q9UHP3 1055 aa16.03■□□□□ 0.16
CLIC4-201ENST00000374379 TMEM131LA2VDJ0 1609 aa16.02■□□□□ 0.16
CLIC4-201ENST00000374379 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
CLIC4-201ENST00000374379 KINO60870 393 aaKnown RBP16.02■□□□□ 0.16
CLIC4-201ENST00000374379 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
CLIC4-201ENST00000374379 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.16
CLIC4-201ENST00000374379 PTH1RQ03431 593 aa16.02■□□□□ 0.15
CLIC4-201ENST00000374379 PIBF1Q8WXW3 757 aa16.02■□□□□ 0.15
CLIC4-201ENST00000374379 AIDAQ96BJ3 306 aa16.02■□□□□ 0.15
CLIC4-201ENST00000374379 IMMTQ16891 758 aaKnown RBP16.02■□□□□ 0.15
CLIC4-201ENST00000374379 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
CLIC4-201ENST00000374379 AKAP2Q9Y2D5 859 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 ERBB3P21860 1342 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 TDO2P48775 406 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 HCLS1P14317 486 aaPredicted RBP16.01■□□□□ 0.15
CLIC4-201ENST00000374379 DNAJC10Q8IXB1 793 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 NUP62CLQ9H1M0 184 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 RAI14Q9P0K7 980 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 SLAIN2Q9P270 581 aa16.01■□□□□ 0.15
CLIC4-201ENST00000374379 ANKRD18BA2A2Z9 1011 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 SYT1P21579 422 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 RASEFQ8IZ41 740 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 CCDC192P0DO97 292 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 TPM4P67936 248 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
CLIC4-201ENST00000374379 Q6ZUG5 572 aa16■□□□□ 0.15
CLIC4-201ENST00000374379 SEC62Q99442 399 aaKnown RBP16■□□□□ 0.15
CLIC4-201ENST00000374379 NPHP4O75161 1426 aaPredicted RBP15.99■□□□□ 0.15
CLIC4-201ENST00000374379 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 TNNI3KQ59H18 835 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 CCDC39Q9UFE4 941 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 FPGT-TNNI3KV9GXZ4 949 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 PAG1Q9NWQ8 432 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 RAD50Q92878 1312 aa15.99■□□□□ 0.15
CLIC4-201ENST00000374379 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
CLIC4-201ENST00000374379 SLC4A8Q2Y0W8 1093 aa15.98■□□□□ 0.15
CLIC4-201ENST00000374379 PLBD2Q8NHP8 589 aa15.98■□□□□ 0.15
CLIC4-201ENST00000374379 DIP2BQ9P265 1576 aa15.98■□□□□ 0.15
CLIC4-201ENST00000374379 PES1O00541 588 aaKnown RBP15.98■□□□□ 0.15
CLIC4-201ENST00000374379 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLIC4-201ENST00000374379 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
CLIC4-201ENST00000374379 ZNF213O14771 459 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms