RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CHGBP05060 677 aa28.74■■■□□ 2.19
CDK9-201ENST00000373264 EVI5LQ96CN4 794 aa28.74■■■□□ 2.19
CDK9-201ENST00000373264 JAKMIP1Q96N16 626 aaKnown RBP28.74■■■□□ 2.19
CDK9-201ENST00000373264 LMTK3Q96Q04 1460 aa28.73■■■□□ 2.19
CDK9-201ENST00000373264 A0A0D9SFI3 127 aa28.72■■■□□ 2.19
CDK9-201ENST00000373264 CABP4P57796 275 aa28.72■■■□□ 2.19
CDK9-201ENST00000373264 TAF6LQ9Y6J9 622 aa28.72■■■□□ 2.19
CDK9-201ENST00000373264 SPATA31A3Q5VYP0 1347 aa28.72■■■□□ 2.19
CDK9-201ENST00000373264 GADD45BO75293 160 aaPredicted RBP28.72■■■□□ 2.19
CDK9-201ENST00000373264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.72■■■□□ 2.19
CDK9-201ENST00000373264 SYCE3A1L190 88 aa28.71■■■□□ 2.19
CDK9-201ENST00000373264 HDAC5Q9UQL6 1122 aa28.71■■■□□ 2.19
CDK9-201ENST00000373264 TCHHQ07283 1943 aa28.71■■■□□ 2.19
CDK9-201ENST00000373264 FMNL2Q96PY5 1086 aa28.7■■■□□ 2.19
CDK9-201ENST00000373264 RUFY2Q8WXA3 655 aa28.7■■■□□ 2.18
CDK9-201ENST00000373264 CADPS2Q86UW7 1296 aa28.69■■■□□ 2.18
CDK9-201ENST00000373264 CCDC9Q9Y3X0 531 aaKnown RBP28.69■■■□□ 2.18
CDK9-201ENST00000373264 CCDC171Q6TFL3 1326 aa28.69■■■□□ 2.18
CDK9-201ENST00000373264 LIMCH1Q9UPQ0 1083 aa28.69■■■□□ 2.18
CDK9-201ENST00000373264 RBM8AQ9Y5S9 174 aaKnown RBP28.69■■■□□ 2.18
CDK9-201ENST00000373264 NECTIN1Q15223 517 aa28.68■■■□□ 2.18
CDK9-201ENST00000373264 TCEANC2Q96MN5 208 aa28.68■■■□□ 2.18
CDK9-201ENST00000373264 RFX5P48382 616 aaPredicted RBP28.68■■■□□ 2.18
CDK9-201ENST00000373264 TFCP2Q12800 502 aa28.68■■■□□ 2.18
CDK9-201ENST00000373264 FSD1Q9BTV5 496 aa28.68■■■□□ 2.18
CDK9-201ENST00000373264 NBPF26B4DH59 902 aa28.67■■■□□ 2.18
CDK9-201ENST00000373264 PTPN12Q05209 780 aaKnown RBP28.67■■■□□ 2.18
CDK9-201ENST00000373264 NBPF14Q5TI25 921 aa28.67■■■□□ 2.18
CDK9-201ENST00000373264 NBPF10Q6P3W6 841 aaKnown RBP28.67■■■□□ 2.18
CDK9-201ENST00000373264 CCDC83Q8IWF9 413 aa28.67■■■□□ 2.18
CDK9-201ENST00000373264 NBPF15Q8N660 670 aa28.67■■■□□ 2.18
CDK9-201ENST00000373264 A0A087WZG4 1122 aa28.67■■■□□ 2.18
CDK9-201ENST00000373264 ZNF589Q86UQ0 364 aaPredicted RBP28.67■■■□□ 2.18
CDK9-201ENST00000373264 PDRG1Q9NUG6 133 aa28.66■■■□□ 2.18
CDK9-201ENST00000373264 DBNLQ9UJU6 430 aaKnown RBP28.66■■■□□ 2.18
CDK9-201ENST00000373264 ST3GAL1Q11201 340 aa28.66■■■□□ 2.18
CDK9-201ENST00000373264 MRC1P22897 1456 aa28.66■■■□□ 2.18
CDK9-201ENST00000373264 CREB3L3Q68CJ9 461 aa28.65■■■□□ 2.18
CDK9-201ENST00000373264 USP48Q86UV5 1035 aa28.65■■■□□ 2.18
CDK9-201ENST00000373264 KCNJ4P48050 445 aa28.65■■■□□ 2.18
CDK9-201ENST00000373264 BRINP3Q76B58 766 aa28.65■■■□□ 2.18
CDK9-201ENST00000373264 NECAB1Q8N987 351 aa28.65■■■□□ 2.18
CDK9-201ENST00000373264 AFDNP55196 1824 aaKnown RBP28.64■■■□□ 2.18
CDK9-201ENST00000373264 SYT1P21579 422 aa28.64■■■□□ 2.18
CDK9-201ENST00000373264 TTLL7Q6ZT98 887 aa28.64■■■□□ 2.18
CDK9-201ENST00000373264 TRIM44Q96DX7 344 aaPredicted RBP28.64■■■□□ 2.17
CDK9-201ENST00000373264 WDR33Q9C0J8 1336 aaKnown RBP28.64■■■□□ 2.17
CDK9-201ENST00000373264 CNPY2Q9Y2B0 182 aa28.64■■■□□ 2.17
CDK9-201ENST00000373264 GLI3P10071 1580 aa28.63■■■□□ 2.17
CDK9-201ENST00000373264 ESPNB1AK53 854 aa28.63■■■□□ 2.17
CDK9-201ENST00000373264 ZSWIM6Q9HCJ5 1215 aa28.63■■■□□ 2.17
CDK9-201ENST00000373264 DCCP43146 1447 aa28.63■■■□□ 2.17
CDK9-201ENST00000373264 MAP4K1Q92918 833 aa28.63■■■□□ 2.17
CDK9-201ENST00000373264 PKD1L3Q7Z443 1732 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 TOM1L2Q6ZVM7 507 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 PRDM11Q9NQV5 511 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 A1BGP04217 495 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 ME3Q16798 604 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 COPRSQ9NQ92 184 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 ARFGEF2Q9Y6D5 1785 aa28.62■■■□□ 2.17
CDK9-201ENST00000373264 SLC27A2O14975 620 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 TNNI3KQ59H18 835 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 KCNB2Q92953 911 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 CYP46A1Q9Y6A2 500 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 FPGT-TNNI3KV9GXZ4 949 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 CASP7P55210 303 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 DBNDD2Q9BQY9 259 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 SMC3Q9UQE7 1217 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 CHMP3Q9Y3E7 222 aa28.61■■■□□ 2.17
CDK9-201ENST00000373264 LMBR1LQ6UX01 489 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 RNF214Q8ND24 703 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 COL15A1P39059 1388 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 STX6O43752 255 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 VPS53Q5VIR6 699 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 TPCN1Q9ULQ1 816 aa28.6■■■□□ 2.17
CDK9-201ENST00000373264 ZSCAN22P10073 491 aaPredicted RBP28.59■■■□□ 2.17
CDK9-201ENST00000373264 GJB2P29033 226 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 CLCN1P35523 988 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 LRSAM1Q6UWE0 723 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 PPP1R9BQ96SB3 815 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 CCDC173Q0VFZ6 552 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 SLFNL1Q499Z3 407 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 CCDC129Q6ZRS4 1044 aa28.59■■■□□ 2.17
CDK9-201ENST00000373264 SEC62Q99442 399 aaKnown RBP28.59■■■□□ 2.17
CDK9-201ENST00000373264 DNAJC2Q99543 621 aaKnown RBP28.59■■■□□ 2.17
CDK9-201ENST00000373264 RABL6Q3YEC7 729 aaPredicted RBP28.58■■■□□ 2.17
CDK9-201ENST00000373264 PLBD2Q8NHP8 589 aa28.58■■■□□ 2.17
CDK9-201ENST00000373264 CPDO75976 1380 aa28.58■■■□□ 2.17
CDK9-201ENST00000373264 ZBTB3Q9H5J0 574 aa28.58■■■□□ 2.17
CDK9-201ENST00000373264 MBD3O95983 291 aa28.57■■■□□ 2.16
CDK9-201ENST00000373264 ZCRB1Q8TBF4 217 aaKnown RBP28.57■■■□□ 2.16
CDK9-201ENST00000373264 ZKSCAN1P17029 563 aaPredicted RBP28.57■■■□□ 2.16
CDK9-201ENST00000373264 MED23Q9ULK4 1368 aa28.56■■■□□ 2.16
CDK9-201ENST00000373264 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.56■■■□□ 2.16
CDK9-201ENST00000373264 STRN4Q9NRL3 753 aa28.55■■■□□ 2.16
CDK9-201ENST00000373264 XIRP1Q702N8 1843 aaKnown RBP28.55■■■□□ 2.16
CDK9-201ENST00000373264 FOXO4P98177 505 aa28.55■■■□□ 2.16
CDK9-201ENST00000373264 TM6SF1Q9BZW5 370 aa28.55■■■□□ 2.16
CDK9-201ENST00000373264 WDR17Q8IZU2 1322 aa28.55■■■□□ 2.16
CDK9-201ENST00000373264 DDX46Q7L014 1031 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms