RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 HOXB7P09629 217 aa21.57■■□□□ 1.04
LCN2-203ENST00000373017 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
LCN2-203ENST00000373017 GLTPD2A6NH11 291 aa21.56■■□□□ 1.04
LCN2-203ENST00000373017 HSPA6P17066 643 aa21.56■■□□□ 1.04
LCN2-203ENST00000373017 CCDC93Q567U6 631 aa21.55■■□□□ 1.04
LCN2-203ENST00000373017 PARP10Q53GL7 1025 aa21.54■■□□□ 1.04
LCN2-203ENST00000373017 SOGA3Q5TF21 947 aa21.54■■□□□ 1.04
LCN2-203ENST00000373017 NLRP10Q86W26 655 aa21.54■■□□□ 1.04
LCN2-203ENST00000373017 SYNE4Q8N205 404 aa21.54■■□□□ 1.04
LCN2-203ENST00000373017 ZNF428Q96B54 188 aa21.54■■□□□ 1.04
LCN2-203ENST00000373017 POTECB2RU33 542 aa21.53■■□□□ 1.04
LCN2-203ENST00000373017 HOXA10P31260 410 aaPredicted RBP21.53■■□□□ 1.04
LCN2-203ENST00000373017 GNAI1P63096 354 aa21.53■■□□□ 1.04
LCN2-203ENST00000373017 TCIRG1Q13488 830 aa21.53■■□□□ 1.04
LCN2-203ENST00000373017 PPP1R42Q7Z4L9 355 aa21.53■■□□□ 1.04
LCN2-203ENST00000373017 UTP14AQ9BVJ6 771 aaKnown RBP21.53■■□□□ 1.04
LCN2-203ENST00000373017 ELL2O00472 640 aaPredicted RBP21.52■■□□□ 1.04
LCN2-203ENST00000373017 ALDH1B1P30837 517 aa21.52■■□□□ 1.04
LCN2-203ENST00000373017 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
LCN2-203ENST00000373017 RBM46Q8TBY0 533 aaKnown RBP21.52■■□□□ 1.04
LCN2-203ENST00000373017 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
LCN2-203ENST00000373017 DBF4Q9UBU7 674 aaPredicted RBP21.52■■□□□ 1.04
LCN2-203ENST00000373017 COL4A5P29400 1685 aa21.52■■□□□ 1.04
LCN2-203ENST00000373017 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
LCN2-203ENST00000373017 SLC10A5Q5PT55 438 aa21.51■■□□□ 1.03
LCN2-203ENST00000373017 ZNF277Q9NRM2 450 aaPredicted RBP21.51■■□□□ 1.03
LCN2-203ENST00000373017 ANP32CO43423 234 aa21.5■■□□□ 1.03
LCN2-203ENST00000373017 CALD1Q05682 793 aaKnown RBP21.5■■□□□ 1.03
LCN2-203ENST00000373017 HSP90AB3PQ58FF7 597 aa21.5■■□□□ 1.03
LCN2-203ENST00000373017 PLBD2Q8NHP8 589 aa21.5■■□□□ 1.03
LCN2-203ENST00000373017 RPGRQ92834 1020 aaKnown RBP21.5■■□□□ 1.03
LCN2-203ENST00000373017 COL4A1P02462 1669 aa21.5■■□□□ 1.03
LCN2-203ENST00000373017 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
LCN2-203ENST00000373017 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
LCN2-203ENST00000373017 HCLS1P14317 486 aaPredicted RBP21.48■■□□□ 1.03
LCN2-203ENST00000373017 C16orf71Q8IYS4 520 aaPredicted RBP21.48■■□□□ 1.03
LCN2-203ENST00000373017 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
LCN2-203ENST00000373017 CRAMP1Q96RY5 1269 aa21.48■■□□□ 1.03
LCN2-203ENST00000373017 ISCA1Q9BUE6 129 aa21.48■■□□□ 1.03
LCN2-203ENST00000373017 PHAXQ9H814 394 aaKnown RBP21.48■■□□□ 1.03
LCN2-203ENST00000373017 HYPKQ9NX55 129 aa21.48■■□□□ 1.03
LCN2-203ENST00000373017 SCN4AP35499 1836 aa21.48■■□□□ 1.03
LCN2-203ENST00000373017 DDNO94850 711 aaPredicted RBP21.47■■□□□ 1.03
LCN2-203ENST00000373017 VEGFAP15692 232 aaPredicted RBP21.47■■□□□ 1.03
LCN2-203ENST00000373017 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
LCN2-203ENST00000373017 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
LCN2-203ENST00000373017 RTKN2Q8IZC4 609 aa21.47■■□□□ 1.03
LCN2-203ENST00000373017 NLRP3Q96P20 1036 aa21.47■■□□□ 1.03
LCN2-203ENST00000373017 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
LCN2-203ENST00000373017 ATP5J2-PTCD1G3V325 749 aa21.46■■□□□ 1.03
LCN2-203ENST00000373017 RBM17Q96I25 401 aaKnown RBP21.46■■□□□ 1.03
LCN2-203ENST00000373017 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
LCN2-203ENST00000373017 ABCC4O15439 1325 aa21.46■■□□□ 1.03
LCN2-203ENST00000373017 LRRC37AA6NMS7 1700 aa21.46■■□□□ 1.03
LCN2-203ENST00000373017 TCERG1O14776 1098 aaKnown RBP21.45■■□□□ 1.02
LCN2-203ENST00000373017 PPEF1O14829 653 aaPredicted RBP21.45■■□□□ 1.02
LCN2-203ENST00000373017 DPY19L2Q6NUT2 758 aa21.45■■□□□ 1.02
LCN2-203ENST00000373017 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
LCN2-203ENST00000373017 ZNF541Q9H0D2 1346 aa21.45■■□□□ 1.02
LCN2-203ENST00000373017 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
LCN2-203ENST00000373017 PSMD1Q99460 953 aa21.44■■□□□ 1.02
LCN2-203ENST00000373017 FSTL1Q12841 308 aa21.43■■□□□ 1.02
LCN2-203ENST00000373017 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
LCN2-203ENST00000373017 HTRA3P83110 453 aa21.42■■□□□ 1.02
LCN2-203ENST00000373017 CC2D2BQ6DHV5 1058 aa21.42■■□□□ 1.02
LCN2-203ENST00000373017 FAM89AQ96GI7 184 aa21.42■■□□□ 1.02
LCN2-203ENST00000373017 LTBP1Q14766 1721 aa21.41■■□□□ 1.02
LCN2-203ENST00000373017 APLP1P51693 650 aa21.41■■□□□ 1.02
LCN2-203ENST00000373017 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
LCN2-203ENST00000373017 DUOX1Q9NRD9 1551 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 FZD9O00144 591 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 SMC1BQ8NDV3 1235 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 ATP6V0A2Q9Y487 856 aa21.4■■□□□ 1.02
LCN2-203ENST00000373017 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
LCN2-203ENST00000373017 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
LCN2-203ENST00000373017 RTL5Q5HYW3 569 aaPredicted RBP21.39■■□□□ 1.01
LCN2-203ENST00000373017 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.01
LCN2-203ENST00000373017 DNAJC5GQ8N7S2 189 aa21.39■■□□□ 1.01
LCN2-203ENST00000373017 L3MBTL3Q96JM7 780 aaPredicted RBP21.39■■□□□ 1.01
LCN2-203ENST00000373017 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.01
LCN2-203ENST00000373017 MYH3P11055 1940 aa21.39■■□□□ 1.01
LCN2-203ENST00000373017 IL16Q14005 1332 aa21.38■■□□□ 1.01
LCN2-203ENST00000373017 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
LCN2-203ENST00000373017 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
LCN2-203ENST00000373017 MYD88Q99836 296 aa21.38■■□□□ 1.01
LCN2-203ENST00000373017 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
LCN2-203ENST00000373017 PCNTO95613 3336 aa21.37■■□□□ 1.01
LCN2-203ENST00000373017 GRAPQ13588 217 aa21.36■■□□□ 1.01
LCN2-203ENST00000373017 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
LCN2-203ENST00000373017 G2E3Q7L622 706 aa21.36■■□□□ 1.01
LCN2-203ENST00000373017 GRAPLQ8TC17 118 aaPredicted RBP21.36■■□□□ 1.01
LCN2-203ENST00000373017 BBOX1O75936 387 aa21.35■■□□□ 1.01
LCN2-203ENST00000373017 SF3B3Q15393 1217 aaKnown RBP21.35■■□□□ 1.01
LCN2-203ENST00000373017 GRIPAP1Q4V328 841 aa21.35■■□□□ 1.01
LCN2-203ENST00000373017 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
LCN2-203ENST00000373017 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
LCN2-203ENST00000373017 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
LCN2-203ENST00000373017 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms