RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 ANKRD13DQ6ZTN6 518 aa18.72■□□□□ 0.59
SSR4-203ENST00000370086 NLRP10Q86W26 655 aa18.72■□□□□ 0.59
SSR4-203ENST00000370086 RNF181Q9P0P0 153 aa18.72■□□□□ 0.59
SSR4-203ENST00000370086 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
SSR4-203ENST00000370086 CRY2Q49AN0 593 aa18.71■□□□□ 0.59
SSR4-203ENST00000370086 WDR63Q8IWG1 891 aa18.71■□□□□ 0.59
SSR4-203ENST00000370086 UTP14AQ9BVJ6 771 aaKnown RBP18.71■□□□□ 0.59
SSR4-203ENST00000370086 GPBP1L1Q9HC44 474 aaPredicted RBP18.71■□□□□ 0.59
SSR4-203ENST00000370086 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
SSR4-203ENST00000370086 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
SSR4-203ENST00000370086 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
SSR4-203ENST00000370086 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
SSR4-203ENST00000370086 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
SSR4-203ENST00000370086 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
SSR4-203ENST00000370086 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
SSR4-203ENST00000370086 LMNB1P20700 586 aa18.68■□□□□ 0.58
SSR4-203ENST00000370086 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
SSR4-203ENST00000370086 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
SSR4-203ENST00000370086 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
SSR4-203ENST00000370086 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
SSR4-203ENST00000370086 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SSR4-203ENST00000370086 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
SSR4-203ENST00000370086 ALDH1B1P30837 517 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 CACNA1FO60840 1977 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 TAF1P21675 1872 aa18.67■□□□□ 0.58
SSR4-203ENST00000370086 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
SSR4-203ENST00000370086 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
SSR4-203ENST00000370086 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
SSR4-203ENST00000370086 C1QTNF8P60827 252 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
SSR4-203ENST00000370086 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
SSR4-203ENST00000370086 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
SSR4-203ENST00000370086 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
SSR4-203ENST00000370086 CCDC93Q567U6 631 aa18.64■□□□□ 0.57
SSR4-203ENST00000370086 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
SSR4-203ENST00000370086 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
SSR4-203ENST00000370086 KIF3CO14782 793 aa18.63■□□□□ 0.57
SSR4-203ENST00000370086 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
SSR4-203ENST00000370086 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
SSR4-203ENST00000370086 CRAMP1Q96RY5 1269 aa18.63■□□□□ 0.57
SSR4-203ENST00000370086 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
SSR4-203ENST00000370086 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
SSR4-203ENST00000370086 VAMP4O75379 141 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 G2E3Q7L622 706 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 MYD88Q99836 296 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
SSR4-203ENST00000370086 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
SSR4-203ENST00000370086 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
SSR4-203ENST00000370086 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
SSR4-203ENST00000370086 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
SSR4-203ENST00000370086 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSR4-203ENST00000370086 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
SSR4-203ENST00000370086 RTKN2Q8IZC4 609 aa18.6■□□□□ 0.57
SSR4-203ENST00000370086 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
SSR4-203ENST00000370086 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
SSR4-203ENST00000370086 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
SSR4-203ENST00000370086 ABCC4O15439 1325 aa18.59■□□□□ 0.57
SSR4-203ENST00000370086 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
SSR4-203ENST00000370086 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
SSR4-203ENST00000370086 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
SSR4-203ENST00000370086 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
SSR4-203ENST00000370086 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
SSR4-203ENST00000370086 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.56
SSR4-203ENST00000370086 COL4A1P02462 1669 aa18.57■□□□□ 0.56
SSR4-203ENST00000370086 GLTPD2A6NH11 291 aa18.57■□□□□ 0.56
SSR4-203ENST00000370086 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
SSR4-203ENST00000370086 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
SSR4-203ENST00000370086 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
SSR4-203ENST00000370086 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
SSR4-203ENST00000370086 IGKV5-2P06315 115 aa18.56■□□□□ 0.56
SSR4-203ENST00000370086 FLIIQ13045 1269 aa18.56■□□□□ 0.56
SSR4-203ENST00000370086 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
SSR4-203ENST00000370086 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
SSR4-203ENST00000370086 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
SSR4-203ENST00000370086 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
SSR4-203ENST00000370086 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
SSR4-203ENST00000370086 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
SSR4-203ENST00000370086 PSMD1Q99460 953 aa18.55■□□□□ 0.56
SSR4-203ENST00000370086 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
SSR4-203ENST00000370086 MYH3P11055 1940 aa18.55■□□□□ 0.56
SSR4-203ENST00000370086 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
SSR4-203ENST00000370086 BBOX1O75936 387 aa18.54■□□□□ 0.56
SSR4-203ENST00000370086 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
SSR4-203ENST00000370086 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
SSR4-203ENST00000370086 GRAPQ13588 217 aa18.54■□□□□ 0.56
SSR4-203ENST00000370086 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
SSR4-203ENST00000370086 COL4A5P29400 1685 aa18.54■□□□□ 0.56
SSR4-203ENST00000370086 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
SSR4-203ENST00000370086 GRIPAP1Q4V328 841 aa18.53■□□□□ 0.56
SSR4-203ENST00000370086 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms