RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 CHRNA2Q15822 529 aa15.2■□□□□ 0.02
GBF1-201ENST00000369983 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
GBF1-201ENST00000369983 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
GBF1-201ENST00000369983 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
GBF1-201ENST00000369983 CCDC83Q8IWF9 413 aa15.2■□□□□ 0.02
GBF1-201ENST00000369983 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
GBF1-201ENST00000369983 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
GBF1-201ENST00000369983 PTPRCP08575 1304 aa15.2■□□□□ 0.02
GBF1-201ENST00000369983 NSD2O96028 1365 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 CCDC172P0C7W6 258 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 IDEP14735 1019 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 CAMSAP2Q08AD1 1489 aa15.19■□□□□ 0.02
GBF1-201ENST00000369983 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
GBF1-201ENST00000369983 CCDC66A2RUB6 948 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 YEATS4O95619 227 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 TBC1D5Q92609 795 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 NUP88Q99567 741 aaPredicted RBP15.18■□□□□ 0.02
GBF1-201ENST00000369983 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 LPXNO60711 386 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
GBF1-201ENST00000369983 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 GOLIM4O00461 696 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 ANO10Q9NW15 660 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 FANCIQ9NVI1 1328 aa15.18■□□□□ 0.02
GBF1-201ENST00000369983 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 SREK1Q8WXA9 508 aaKnown RBP15.17■□□□□ 0.02
GBF1-201ENST00000369983 GBP3Q9H0R5 595 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 EVI5LQ96CN4 794 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
GBF1-201ENST00000369983 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 ZSCAN12O43309 604 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 KIF5CO60282 957 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 KRT13P13646 458 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
GBF1-201ENST00000369983 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 OTUD6BQ8N6M0 293 aa15.17■□□□□ 0.02
GBF1-201ENST00000369983 IMPG2Q9BZV3 1241 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 STX8Q9UNK0 236 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 CEP63Q96MT8 703 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 ALS2CR12Q96Q35 445 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
GBF1-201ENST00000369983 MCM3P25205 808 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
GBF1-201ENST00000369983 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 CYP7A1P22680 504 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 UBA7P41226 1012 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
GBF1-201ENST00000369983 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 PAFAH1B1P43034 410 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 UBE4AQ14139 1066 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 KRT23Q9C075 422 aa15.16■□□□□ 0.02
GBF1-201ENST00000369983 NCOA7Q8NI08 942 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
GBF1-201ENST00000369983 TTC12Q9H892 705 aaPredicted RBP15.15■□□□□ 0.02
GBF1-201ENST00000369983 ZNF408Q9H9D4 720 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 ARL1P40616 181 aaPredicted RBP15.15■□□□□ 0.02
GBF1-201ENST00000369983 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 FANCAO15360 1455 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 PLCG2P16885 1265 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 CASQ1P31415 396 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.023e-6■□□□□ 10.8
GBF1-201ENST00000369983 MAP9Q49MG5 647 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
GBF1-201ENST00000369983 SMARCA5O60264 1052 aaPredicted RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 DDX12PQ92771 950 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 C6orf50Q9HD87 102 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 FSD2A1L4K1 749 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 TOP1P11387 765 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 NBPF7P0C2Y1 421 aaPredicted RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 GNAQP50148 359 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 CAMK4Q16566 473 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 DDX23Q9BUQ8 820 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 SCAND2PQ9GZW5 306 aaPredicted RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 IKBKGQ9Y6K9 419 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 CUL7Q14999 1698 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
GBF1-201ENST00000369983 PICK1Q9NRD5 415 aa15.14■□□□□ 0.01
GBF1-201ENST00000369983 DNA2P51530 1060 aa15.13■□□□□ 0.01
GBF1-201ENST00000369983 LRRC59Q96AG4 307 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms