RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SLC10A5Q5PT55 438 aa26.6■■□□□ 1.85
SMNDC1-201ENST00000369592 C9orf131Q5VYM1 1079 aa26.6■■□□□ 1.85
SMNDC1-201ENST00000369592 PRPF40BQ6NWY9 871 aaKnown RBP26.6■■□□□ 1.85
SMNDC1-201ENST00000369592 ANKRD13DQ6ZTN6 518 aa26.59■■□□□ 1.85
SMNDC1-201ENST00000369592 NLRP10Q86W26 655 aa26.59■■□□□ 1.85
SMNDC1-201ENST00000369592 PPP1R42Q7Z4L9 355 aa26.58■■□□□ 1.85
SMNDC1-201ENST00000369592 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.85
SMNDC1-201ENST00000369592 RNF123Q5XPI4 1314 aa26.58■■□□□ 1.85
SMNDC1-201ENST00000369592 C21orf2O43822 256 aa26.57■■□□□ 1.84
SMNDC1-201ENST00000369592 HOXA10P31260 410 aaPredicted RBP26.57■■□□□ 1.84
SMNDC1-201ENST00000369592 RASSF7Q02833 373 aa26.57■■□□□ 1.84
SMNDC1-201ENST00000369592 GTF2E1P29083 439 aaPredicted RBP26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 UTP14AQ9BVJ6 771 aaKnown RBP26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 PHAXQ9H814 394 aaKnown RBP26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 DICER1Q9UPY3 1922 aaKnown RBP26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 ZNF521Q96K83 1311 aa26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 FANCIQ9NVI1 1328 aa26.56■■□□□ 1.84
SMNDC1-201ENST00000369592 TRIM28Q13263 835 aaKnown RBP26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 CCDC30Q5VVM6 783 aa26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 C3orf67Q6ZVT6 689 aa26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 CHMP4AQ9BY43 222 aa26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 SPINK5Q9NQ38 1064 aaPredicted RBP26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 LTBP3Q9NS15 1303 aa26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 LAMB2P55268 1798 aa26.55■■□□□ 1.84
SMNDC1-201ENST00000369592 DNAJC5GQ8N7S2 189 aa26.54■■□□□ 1.84
SMNDC1-201ENST00000369592 CACNA1FO60840 1977 aa26.54■■□□□ 1.84
SMNDC1-201ENST00000369592 SNED1Q8TER0 1413 aa26.54■■□□□ 1.84
SMNDC1-201ENST00000369592 LMNB1P20700 586 aa26.53■■□□□ 1.84
SMNDC1-201ENST00000369592 RNF181Q9P0P0 153 aa26.53■■□□□ 1.84
SMNDC1-201ENST00000369592 SALL2Q9Y467 1007 aaPredicted RBP26.53■■□□□ 1.84
SMNDC1-201ENST00000369592 TWISTNBQ3B726 338 aaPredicted RBP26.52■■□□□ 1.84
SMNDC1-201ENST00000369592 ZC3H4Q9UPT8 1303 aaKnown RBP26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 TOMM70O94826 608 aa26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 ALDH1B1P30837 517 aa26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 SOGA3Q5TF21 947 aa26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 SYNE4Q8N205 404 aa26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 DDX60Q8IY21 1712 aaKnown RBP26.51■■□□□ 1.83
SMNDC1-201ENST00000369592 CCER2I3L3R5 266 aa26.5■■□□□ 1.83
SMNDC1-201ENST00000369592 CRAMP1Q96RY5 1269 aa26.5■■□□□ 1.83
SMNDC1-201ENST00000369592 ZNF219Q9P2Y4 722 aaPredicted RBP26.5■■□□□ 1.83
SMNDC1-201ENST00000369592 TIAM2Q8IVF5 1701 aa26.48■■□□□ 1.83
SMNDC1-201ENST00000369592 VAMP4O75379 141 aa26.48■■□□□ 1.83
SMNDC1-201ENST00000369592 TRMT112Q9UI30 125 aaKnown RBP26.48■■□□□ 1.83
SMNDC1-201ENST00000369592 SH3TC1Q8TE82 1336 aa26.47■■□□□ 1.83
SMNDC1-201ENST00000369592 ATP5J2-PTCD1G3V325 749 aa26.47■■□□□ 1.83
SMNDC1-201ENST00000369592 CAPN15O75808 1086 aa26.47■■□□□ 1.83
SMNDC1-201ENST00000369592 OLFM4Q6UX06 510 aa26.47■■□□□ 1.83
SMNDC1-201ENST00000369592 NLRP3Q96P20 1036 aa26.47■■□□□ 1.83
SMNDC1-201ENST00000369592 GOLGA2Q08379 1002 aa26.46■■□□□ 1.83
SMNDC1-201ENST00000369592 CCDC93Q567U6 631 aa26.46■■□□□ 1.83
SMNDC1-201ENST00000369592 TAOK3Q9H2K8 898 aa26.46■■□□□ 1.83
SMNDC1-201ENST00000369592 HCLS1P14317 486 aaPredicted RBP26.45■■□□□ 1.82
SMNDC1-201ENST00000369592 EXOSC9Q06265 439 aaKnown RBP26.45■■□□□ 1.82
SMNDC1-201ENST00000369592 COL13A1Q5TAT6 717 aaPredicted RBP26.45■■□□□ 1.82
SMNDC1-201ENST00000369592 RIC3Q7Z5B4 369 aa26.45■■□□□ 1.82
SMNDC1-201ENST00000369592 WDR90Q96KV7 1748 aa26.45■■□□□ 1.82
SMNDC1-201ENST00000369592 G2E3Q7L622 706 aa26.44■■□□□ 1.82
SMNDC1-201ENST00000369592 RPGRQ92834 1020 aaKnown RBP26.44■■□□□ 1.82
SMNDC1-201ENST00000369592 RBM17Q96I25 401 aaKnown RBP26.44■■□□□ 1.82
SMNDC1-201ENST00000369592 METTL22Q9BUU2 404 aaPredicted RBP26.44■■□□□ 1.82
SMNDC1-201ENST00000369592 NMRK2Q9NPI5 230 aa26.44■■□□□ 1.82
SMNDC1-201ENST00000369592 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
SMNDC1-201ENST00000369592 KSR2Q6VAB6 950 aa26.42■■□□□ 1.82
SMNDC1-201ENST00000369592 RTKN2Q8IZC4 609 aa26.42■■□□□ 1.82
SMNDC1-201ENST00000369592 STK31Q9BXU1 1019 aa26.42■■□□□ 1.82
SMNDC1-201ENST00000369592 TAF1P21675 1872 aa26.42■■□□□ 1.82
SMNDC1-201ENST00000369592 DDX58O95786 925 aaKnown RBP26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 SLC4A2P04920 1241 aa26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 HTRA3P83110 453 aa26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 FKBP4Q02790 459 aaKnown RBP eCLIP26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 CC2D2BQ6DHV5 1058 aa26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 FAM89AQ96GI7 184 aa26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 MYH16Q9H6N6 1097 aa26.41■■□□□ 1.82
SMNDC1-201ENST00000369592 ABCC4O15439 1325 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 PI4KAP2A4QPH2 592 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 SF3B3Q15393 1217 aaKnown RBP26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 SLC51AQ86UW1 340 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 PI4KAP1Q8N8J0 262 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 CCDC191Q8NCU4 936 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 MYD88Q99836 296 aa26.4■■□□□ 1.82
SMNDC1-201ENST00000369592 GLTPD2A6NH11 291 aa26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 ZBTB38Q8NAP3 1195 aaPredicted RBP26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 ZNF428Q96B54 188 aa26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 KLRG1Q96E93 195 aa26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 PSMD1Q99460 953 aa26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 MAP3K2Q9Y2U5 619 aa26.39■■□□□ 1.82
SMNDC1-201ENST00000369592 IGKV5-2P06315 115 aa26.38■■□□□ 1.81
SMNDC1-201ENST00000369592 KDM2BQ8NHM5 1336 aa26.38■■□□□ 1.81
SMNDC1-201ENST00000369592 GRIPAP1Q4V328 841 aa26.37■■□□□ 1.81
SMNDC1-201ENST00000369592 RBM46Q8TBY0 533 aaKnown RBP26.37■■□□□ 1.81
SMNDC1-201ENST00000369592 COL4A1P02462 1669 aa26.36■■□□□ 1.81
SMNDC1-201ENST00000369592 PPEF1O14829 653 aaPredicted RBP26.36■■□□□ 1.81
SMNDC1-201ENST00000369592 PCCAP05165 728 aaPredicted RBP26.36■■□□□ 1.81
SMNDC1-201ENST00000369592 FLIIQ13045 1269 aa26.36■■□□□ 1.81
SMNDC1-201ENST00000369592 ATP6V0A2Q9Y487 856 aa26.36■■□□□ 1.81
SMNDC1-201ENST00000369592 BBOX1O75936 387 aa26.35■■□□□ 1.81
SMNDC1-201ENST00000369592 C16orf71Q8IYS4 520 aaPredicted RBP26.35■■□□□ 1.81
SMNDC1-201ENST00000369592 TNS4Q8IZW8 715 aa26.35■■□□□ 1.81
SMNDC1-201ENST00000369592 JMYQ8N9B5 988 aa26.35■■□□□ 1.81
SMNDC1-201ENST00000369592 ZNF277Q9NRM2 450 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms