RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 LUZP1Q86V48 1076 aa10.61□□□□□ -0.71
THBS3-201ENST00000368378 IBTKQ9P2D0 1353 aaPredicted RBP10.61□□□□□ -0.71
THBS3-201ENST00000368378 BICD2Q8TD16 824 aa10.61□□□□□ -0.71
THBS3-201ENST00000368378 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
THBS3-201ENST00000368378 TCHHQ07283 1943 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 SALL3Q9BXA9 1300 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 ZSCAN22P10073 491 aaPredicted RBP10.6□□□□□ -0.71
THBS3-201ENST00000368378 CDC37L1Q7L3B6 337 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 KDRP35968 1356 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 SEC62Q99442 399 aaKnown RBP10.6□□□□□ -0.71
THBS3-201ENST00000368378 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
THBS3-201ENST00000368378 SGSM2O43147 1006 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 ME3Q16798 604 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
THBS3-201ENST00000368378 NEUROD6Q96NK8 337 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 MCM2P49736 904 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
THBS3-201ENST00000368378 HSP90AB3PQ58FF7 597 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 IPO4Q8TEX9 1081 aaKnown RBP10.59□□□□□ -0.71
THBS3-201ENST00000368378 FTOQ9C0B1 505 aaKnown RBP eCLIP10.59□□□□□ -0.71
THBS3-201ENST00000368378 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.59□□□□□ -0.71
THBS3-201ENST00000368378 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
THBS3-201ENST00000368378 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
THBS3-201ENST00000368378 F13A1P00488 732 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 HSPA4P34932 840 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 CCT2P78371 535 aaKnown RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 LRMPQ12912 555 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 RBM8AQ9Y5S9 174 aaKnown RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 JAK2O60674 1132 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 LIG1P18858 919 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 GTF2E1P29083 439 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 C1orf141Q5JVX7 400 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 NOLC1Q14978 699 aaKnown RBP eCLIP10.58□□□□□ -0.72
THBS3-201ENST00000368378 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
THBS3-201ENST00000368378 TRIM5Q9C035 493 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 KCNG1Q9UIX4 513 aa10.58□□□□□ -0.72
THBS3-201ENST00000368378 PHF14O94880 888 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 PTGS1P23219 599 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 CCDC183Q5T5S1 534 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 ISM2Q6H9L7 571 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 BICC1Q9H694 974 aaKnown RBP10.57□□□□□ -0.72
THBS3-201ENST00000368378 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 PYCARDQ9ULZ3 195 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.57□□□□□ -0.72
THBS3-201ENST00000368378 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 H3BQV1 296 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 AP5Z1O43299 807 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 NAA30Q147X3 362 aaPredicted RBP10.57□□□□□ -0.72
THBS3-201ENST00000368378 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
THBS3-201ENST00000368378 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 DACT1Q9NYF0 836 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 STAP2Q9UGK3 403 aa10.57□□□□□ -0.72
THBS3-201ENST00000368378 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
THBS3-201ENST00000368378 CUL4AQ13619 759 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
THBS3-201ENST00000368378 RAD50Q92878 1312 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 ANAPC15P60006 121 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 LARP1Q6PKG0 1096 aaKnown RBP10.56□□□□□ -0.72
THBS3-201ENST00000368378 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
THBS3-201ENST00000368378 PDLIM2Q96JY6 352 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 MYD88Q99836 296 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 PTPN21Q16825 1174 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 SUCLG2Q96I99 432 aa10.56□□□□□ -0.72
THBS3-201ENST00000368378 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 DNAJC25Q9H1X3 360 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
THBS3-201ENST00000368378 GLRX3O76003 335 aaKnown RBP10.55□□□□□ -0.72
THBS3-201ENST00000368378 EIF4A1P60842 406 aaKnown RBP10.55□□□□□ -0.72
THBS3-201ENST00000368378 SPATA32Q96LK8 384 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
THBS3-201ENST00000368378 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
THBS3-201ENST00000368378 RPAP1Q9BWH6 1393 aaPredicted RBP10.54□□□□□ -0.72
THBS3-201ENST00000368378 PIK3C2AO00443 1686 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 UBE2HP62256 183 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms