RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 AKAP4Q5JQC9 854 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 NCOA5Q9HCD5 579 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 GJB4Q9NTQ9 266 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 FSD2A1L4K1 749 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 ADAMTS2O95450 1211 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 RXRAP19793 462 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 TTLL5Q6EMB2 1281 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 OTUD7BQ6GQQ9 843 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 KLHL34Q8N239 644 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 SSH3Q8TE77 659 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-202ENST00000367718 KIAA0232Q92628 1395 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 GJB2P29033 226 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 NEXNQ0ZGT2 675 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 LRRC24Q50LG9 513 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 DNTTIP2Q5QJE6 756 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 FAM182BQ5T319 152 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 KSR2Q6VAB6 950 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 PDRG1Q9NUG6 133 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 R3HCC1Q9Y3T6 440 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 NUTM2BA6NNL0 878 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 NUTM2EB1AL46 878 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 ANKRD13DQ6ZTN6 518 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 NUTM2AQ8IVF1 878 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 ACSBG1Q96GR2 724 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 ECHDC1Q9NTX5 307 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 PCNTO95613 3336 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 USP31Q70CQ4 1352 aa6.77□□□□□ -1.33
TNFSF4-202ENST00000367718 SGSM2O43147 1006 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 SYT1P21579 422 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 NUCB2P80303 420 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 GORABQ5T7V8 394 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 ME3Q16798 604 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 USP32Q8NFA0 1604 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 EP400Q96L91 3159 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 PTPN21Q16825 1174 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 WASHC4Q2M389 1173 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 ISM2Q6H9L7 571 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 LARP1Q6PKG0 1096 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 TTC12Q9H892 705 aaPredicted RBP6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 DENND2AQ9ULE3 1009 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 TBC1D2BQ9UPU7 963 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 JAG2Q9Y219 1238 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 DIP2AQ14689 1571 aa6.76□□□□□ -1.33
TNFSF4-202ENST00000367718 NEURL4Q96JN8 1562 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 CDC37L1Q7L3B6 337 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 KCNH5Q8NCM2 988 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 DBNLQ9UJU6 430 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 ASAP1Q9ULH1 1129 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 PDIA6Q15084 440 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 KLHL40Q2TBA0 621 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 ERBB3P21860 1342 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 MSNP26038 577 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 ADORA1P30542 326 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 GCKRQ14397 625 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 KDRP35968 1356 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 TMEM94Q12767 1356 aa6.75□□□□□ -1.33
TNFSF4-202ENST00000367718 WTIPA6NIX2 430 aaPredicted RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 GLRX3O76003 335 aaKnown RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 DDX58O95786 925 aaKnown RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 PHKG2P15735 406 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 CREB3L3Q68CJ9 461 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 BICDL1Q6ZP65 573 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 BRF1Q92994 677 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 SIRT1Q96EB6 747 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 SSH2Q76I76 1423 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 NPHP3Q7Z494 1330 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 NBPF26B4DH59 902 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 APPP05067 770 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 HSPA4P34932 840 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 NBPF14Q5TI25 921 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 NBPF10Q6P3W6 841 aaKnown RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 NBPF15Q8N660 670 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 CIZ1Q9ULV3 898 aaPredicted RBP6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 MTMR7Q9Y216 660 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 CYP46A1Q9Y6A2 500 aa6.74□□□□□ -1.33
TNFSF4-202ENST00000367718 ZNF335Q9H4Z2 1342 aaPredicted RBP6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 STX6O43752 255 aa6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 LINS1Q8NG48 757 aa6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
TNFSF4-202ENST00000367718 FBXO3Q9UK99 471 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms