RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 GRIK4Q16099 956 aa11.92□□□□□ -0.5
CFHR3-202ENST00000367427 RAB44Q7Z6P3 723 aaPredicted RBP11.92□□□□□ -0.5
CFHR3-202ENST00000367427 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
CFHR3-202ENST00000367427 BRD7Q9NPI1 651 aa11.92□□□□□ -0.5
CFHR3-202ENST00000367427 KRTAP9-6A0A140TA67 174 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 ZNF280CQ8ND82 737 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
CFHR3-202ENST00000367427 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
CFHR3-202ENST00000367427 M0R2N6 131 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 RFX1P22670 979 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 TYRO3Q06418 890 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 NACC1Q96RE7 527 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
CFHR3-202ENST00000367427 SFI1A8K8P3 1242 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 DKK1O94907 266 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 NEUROD1Q13562 356 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 PHACTR1Q9C0D0 580 aa11.89□□□□□ -0.51
CFHR3-202ENST00000367427 C21orf2O43822 256 aa11.87□□□□□ -0.51
CFHR3-202ENST00000367427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.86□□□□□ -0.51
CFHR3-202ENST00000367427 USP17L3A6NCW0 530 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 USP17L4A6NCW7 530 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 SELPP16109 830 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 ADGRE1Q14246 886 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 USP17L1Q7RTZ2 530 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 UCN2Q96RP3 112 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 USTQ9Y2C2 406 aa11.86□□□□□ -0.51
CFHR3-202ENST00000367427 PRSS36Q5K4E3 855 aa11.85□□□□□ -0.51
CFHR3-202ENST00000367427 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
CFHR3-202ENST00000367427 C9orf172C9J069 976 aa11.84□□□□□ -0.51
CFHR3-202ENST00000367427 LILRB5O75023 590 aa11.84□□□□□ -0.51
CFHR3-202ENST00000367427 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
CFHR3-202ENST00000367427 ARTNQ5T4W7 220 aa11.84□□□□□ -0.51
CFHR3-202ENST00000367427 SIX5Q8N196 739 aa11.84□□□□□ -0.51
CFHR3-202ENST00000367427 A0A0A0MRY4 1105 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 BRD1O95696 1058 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 BHMTQ93088 406 aa11.83□□□□□ -0.52
CFHR3-202ENST00000367427 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
CFHR3-202ENST00000367427 H2AFB1P0C5Y9 115 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 H2AFB2P0C5Z0 115 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 ELNP15502 786 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
CFHR3-202ENST00000367427 MBTPS1Q14703 1052 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 TSEN2Q8NCE0 465 aaKnown RBP11.82□□□□□ -0.52
CFHR3-202ENST00000367427 RGS22Q8NE09 1264 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 CHMP3Q9Y3E7 222 aa11.82□□□□□ -0.52
CFHR3-202ENST00000367427 ATP9BO43861 1147 aa11.81□□□□□ -0.52
CFHR3-202ENST00000367427 KCNA1Q09470 495 aa11.81□□□□□ -0.52
CFHR3-202ENST00000367427 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
CFHR3-202ENST00000367427 ALDH16A1Q8IZ83 802 aa11.81□□□□□ -0.52
CFHR3-202ENST00000367427 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
CFHR3-202ENST00000367427 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
CFHR3-202ENST00000367427 EFCC1Q9HA90 598 aa11.8□□□□□ -0.52
CFHR3-202ENST00000367427 ZFP64Q9NPA5 681 aa11.8□□□□□ -0.52
CFHR3-202ENST00000367427 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
CFHR3-202ENST00000367427 SLC6A14Q9UN76 642 aa11.8□□□□□ -0.52
CFHR3-202ENST00000367427 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
CFHR3-202ENST00000367427 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
CFHR3-202ENST00000367427 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
CFHR3-202ENST00000367427 GSX2Q9BZM3 304 aa11.79□□□□□ -0.52
CFHR3-202ENST00000367427 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
CFHR3-202ENST00000367427 ATAD2Q6PL18 1390 aa11.78□□□□□ -0.52
CFHR3-202ENST00000367427 AFF1P51825 1210 aaKnown RBP11.77□□□□□ -0.53
CFHR3-202ENST00000367427 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.53
CFHR3-202ENST00000367427 SSBP4Q9BWG4 385 aaPredicted RBP11.77□□□□□ -0.53
CFHR3-202ENST00000367427 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
CFHR3-202ENST00000367427 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
CFHR3-202ENST00000367427 SHISA2Q6UWI4 295 aa11.76□□□□□ -0.53
CFHR3-202ENST00000367427 GAS2L2Q8NHY3 880 aa11.76□□□□□ -0.53
CFHR3-202ENST00000367427 JPH1Q9HDC5 661 aaPredicted RBP11.76□□□□□ -0.53
CFHR3-202ENST00000367427 DMGDHQ9UI17 866 aaKnown RBP11.76□□□□□ -0.53
CFHR3-202ENST00000367427 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
CFHR3-202ENST00000367427 NRG1Q02297 640 aaPredicted RBP11.75□□□□□ -0.53
CFHR3-202ENST00000367427 NUDT8Q8WV74 236 aa11.75□□□□□ -0.53
CFHR3-202ENST00000367427 IER5Q5VY09 327 aa11.74□□□□□ -0.53
CFHR3-202ENST00000367427 DNAJB12Q9NXW2 375 aaKnown RBP11.74□□□□□ -0.53
CFHR3-202ENST00000367427 GRNP28799 593 aaKnown RBP11.73□□□□□ -0.53
CFHR3-202ENST00000367427 RAC1P63000 192 aa11.73□□□□□ -0.53
CFHR3-202ENST00000367427 HIF1AQ16665 826 aa11.73□□□□□ -0.53
CFHR3-202ENST00000367427 FMR1NBQ8N0W7 255 aaPredicted RBP11.73□□□□□ -0.53
CFHR3-202ENST00000367427 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
CFHR3-202ENST00000367427 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
CFHR3-202ENST00000367427 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
CFHR3-202ENST00000367427 TBC1D8BQ0IIM8 1120 aa11.72□□□□□ -0.53
CFHR3-202ENST00000367427 PSAPL1Q6NUJ1 521 aa11.72□□□□□ -0.53
CFHR3-202ENST00000367427 SCG3Q8WXD2 468 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms