RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
NLRP3-204ENST00000366497 TRIM22Q8IYM9 498 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 NEK1Q96PY6 1258 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 TFCP2Q12800 502 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
NLRP3-204ENST00000366497 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
NLRP3-204ENST00000366497 TMEM94Q12767 1356 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 A1BGP04217 495 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 HAND2P61296 217 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 ZNF213O14771 459 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 SLC3A2P08195 630 aaKnown RBP10.48□□□□□ -0.73
NLRP3-204ENST00000366497 CCT2P78371 535 aaKnown RBP10.48□□□□□ -0.73
NLRP3-204ENST00000366497 MAP3K12Q12852 859 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 NAPBQ9H115 298 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 BRMS1Q9HCU9 246 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 ZPR1O75312 459 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 SLC5A1P13866 664 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 NEXMIFQ5QGS0 1516 aa10.48□□□□□ -0.73
NLRP3-204ENST00000366497 TOM1O60784 492 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 DDB1Q16531 1140 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 KLHL40Q2TBA0 621 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 SIRT2Q8IXJ6 389 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 NAT10Q9H0A0 1025 aaKnown RBP10.47□□□□□ -0.73
NLRP3-204ENST00000366497 NUP62CLQ9H1M0 184 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 NPHP4O75161 1426 aaPredicted RBP10.47□□□□□ -0.73
NLRP3-204ENST00000366497 GUCY1B3Q02153 619 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 PTPRMP28827 1452 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 PLBD2Q8NHP8 589 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 SSH3Q8TE77 659 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 LRRC2Q9BYS8 371 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 MINDY4BA8MYZ0 360 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 CDKL5O76039 1030 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 PHKG2P15735 406 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 GCKRQ14397 625 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 ZNF592Q92610 1267 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 BRF1Q92994 677 aa10.47□□□□□ -0.73
NLRP3-204ENST00000366497 SCAND2PQ9GZW5 306 aaPredicted RBP10.47□□□□□ -0.73
NLRP3-204ENST00000366497 TFIP11Q9UBB9 837 aaKnown RBP10.47□□□□□ -0.73
NLRP3-204ENST00000366497 ATP6V1AP38606 617 aa10.46□□□□□ -0.73
NLRP3-204ENST00000366497 MCMDC2Q4G0Z9 681 aa10.46□□□□□ -0.73
NLRP3-204ENST00000366497 TIMM10P62072 90 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 BEND3Q5T5X7 828 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.46□□□□□ -0.74
NLRP3-204ENST00000366497 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 RBM27Q9P2N5 1060 aaKnown RBP10.46□□□□□ -0.74
NLRP3-204ENST00000366497 ESPNB1AK53 854 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 TPM3P06753 285 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 CAMK4Q16566 473 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 SPC24Q8NBT2 197 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 FAM89AQ96GI7 184 aa10.46□□□□□ -0.74
NLRP3-204ENST00000366497 A0A0U1RQG5 324 aaPredicted RBP10.45□□□□□ -0.74
NLRP3-204ENST00000366497 CPA1P15085 419 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 AK2P54819 239 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
NLRP3-204ENST00000366497 PROSER3Q2NL68 480 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 PAG1Q9NWQ8 432 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 NRXN1Q9ULB1 1477 aa10.45□□□□□ -0.74
NLRP3-204ENST00000366497 DZIP3Q86Y13 1208 aaKnown RBP10.45□□□□□ -0.74
NLRP3-204ENST00000366497 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 OLFM4Q6UX06 510 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 MED14O60244 1454 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 GOLGA8BA8MQT2 603 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 SGSM2O43147 1006 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 CREB3L3Q68CJ9 461 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 C8orf76Q96K31 380 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 DBNDD2Q9BQY9 259 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 CPSF1Q10570 1443 aaKnown RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 ZSCAN22P10073 491 aaPredicted RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 CDC5LQ99459 802 aaKnown RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
NLRP3-204ENST00000366497 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
NLRP3-204ENST00000366497 ERBB3P21860 1342 aa10.43□□□□□ -0.74
NLRP3-204ENST00000366497 AOX1Q06278 1338 aa10.43□□□□□ -0.74
NLRP3-204ENST00000366497 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
NLRP3-204ENST00000366497 PRAMEF22A3QJZ6 481 aa10.43□□□□□ -0.74
NLRP3-204ENST00000366497 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
NLRP3-204ENST00000366497 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
NLRP3-204ENST00000366497 IRS4O14654 1257 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms