RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SCTRP47872 440 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 PCSK7Q16549 785 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 QPCTQ16769 361 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 TMEM132AQ24JP5 1023 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 PSAPL1Q6NUJ1 521 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 ANKLE2Q86XL3 938 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 FLCNQ8NFG4 579 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 SHKBP1Q8TBC3 707 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 NTN5Q8WTR8 489 aaPredicted RBP1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 NUDT8Q8WV74 236 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 TMEM40Q8WWA1 233 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 UTP4Q969X6 686 aaKnown RBP1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 TMPRSS5Q9H3S3 457 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 C7orf69Q9H7B7 122 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 EFCC1Q9HA90 598 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 PCDHB9Q9Y5E1 797 aa1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 GPC6Q9Y625 555 aaPredicted RBP1.55□□□□□ -2.16
RNU6-54P-201ENST00000365563 INHBBP09529 407 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 CFPP27918 469 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 NR6A1Q15406 480 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 LCNL1Q6ZST4 164 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 MAP4K3Q8IVH8 894 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 TRIM42Q8IWZ5 723 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 FAM168AQ92567 244 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 RELTQ969Z4 430 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 SLC30A3Q99726 388 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 ATG3Q9NT62 314 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 HCN2Q9UL51 889 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 LEMD3Q9Y2U8 911 aa1.54□□□□□ -2.16
RNU6-54P-201ENST00000365563 SERINC4A6NH21 518 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 DLL1O00548 723 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 FOSL1P15407 271 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 CTDSPL2Q05D32 466 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 MSMPQ1L6U9 139 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 RTL5Q5HYW3 569 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 ERICH6BQ5W0A0 696 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 RAB44Q7Z6P3 723 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 ATG4DQ86TL0 474 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 CLEC10AQ8IUN9 316 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 MYRFLQ96LU7 910 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 BSDC1Q9NW68 430 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 FAM53CQ9NYF3 392 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 FRRS1LQ9P0K9 344 aa1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 ZNF330Q9Y3S2 320 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.53□□□□□ -2.16
RNU6-54P-201ENST00000365563 HMX2A2RU54 273 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZBBXA8MT70 800 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 WDR64B1ANS9 1081 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 ALX3O95076 343 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 ONECUT2O95948 504 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 SKIP12755 728 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 SYN1P17600 705 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 AMHR2Q16671 573 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 ILDR2Q71H61 639 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 C1QL4Q86Z23 238 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 LRRN4Q8WUT4 740 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 BHMTQ93088 406 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 PNMA5Q96PV4 448 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 SLC4A9Q96Q91 983 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 FAM83CQ9BQN1 747 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 METTL22Q9BUU2 404 aaPredicted RBP1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 OSBPL1AQ9BXW6 950 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 KCNF1Q9H3M0 494 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 IGFLR1Q9H665 355 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 DNAJB12Q9NXW2 375 aaKnown RBP1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 LIMD1Q9UGP4 676 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 HIF3AQ9Y2N7 669 aa1.52□□□□□ -2.17
RNU6-54P-201ENST00000365563 CARMIL2Q6F5E8 1435 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 LRRC10BA6NIK2 292 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 SART1O43290 800 aaKnown RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 DEAF1O75398 565 aaPredicted RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 HOXA10P31260 410 aaPredicted RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 CLK2P49760 499 aaKnown RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 SFSWAPQ12872 951 aaKnown RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 PLCL1Q15111 1095 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 ECM1Q16610 540 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 CRTC2Q53ET0 693 aaPredicted RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 MYSM1Q5VVJ2 828 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 ELMSAN1Q6PJG2 1045 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 LRRC69Q6ZNQ3 347 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 FAM35AQ86V20 835 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 AMIGO3Q86WK7 504 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 CILP2Q8IUL8 1156 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 ARMC10Q8N2F6 343 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 ETNK1Q9HBU6 452 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 BRD7Q9NPI1 651 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 NAGPAQ9UK23 515 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 KCNH4Q9UQ05 1017 aa1.51□□□□□ -2.17
RNU6-54P-201ENST00000365563 OVOL3O00110 214 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 ARID4AP29374 1257 aaPredicted RBP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 SMTNP53814 917 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 KCNQ4P56696 695 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 MESP2Q0VG99 397 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZNF792Q3KQV3 632 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 CIAPIN1Q6FI81 312 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 BEND4Q6ZU67 534 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 FAM20CQ8IXL6 584 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 STK11IPQ8N1F8 1099 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms