RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 GAS6Q14393 721 aa8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 NLRP8Q86W28 1048 aa8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 L3MBTL2Q969R5 705 aa8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 TSPAN10Q9H1Z9 355 aaPredicted RBP8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 ARHGEF40Q8TER5 1519 aa8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 RIMS1Q86UR5 1692 aaKnown RBP8.53□□□□□ -1.04
RNU4-4P-201ENST00000364588 CFAP74Q9C0B2 1584 aa8.52□□□□□ -1.04
RNU4-4P-201ENST00000364588 NOS2P35228 1153 aa8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 ATXN7L1Q9ULK2 861 aaPredicted RBP8.52□□□□□ -1.05
RNU4-4P-201ENST00000364588 PPP1R12BO60237 982 aaPredicted RBP8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 MX2P20592 715 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 RFX1P22670 979 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 BICDL1Q6ZP65 573 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
RNU4-4P-201ENST00000364588 EML1O00423 815 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 THBS1P07996 1170 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 POTEAQ6S8J7 498 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 YEATS2Q9ULM3 1422 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
RNU4-4P-201ENST00000364588 ZMYM4Q5VZL5 1548 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 ZFYVE16Q7Z3T8 1539 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 UBAP2LQ14157 1087 aaKnown RBP8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 ARXQ96QS3 562 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 HINFPQ9BQA5 517 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 NOVA2Q9UNW9 492 aaKnown RBP8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 HECW1Q76N89 1606 aa8.49□□□□□ -1.05
RNU4-4P-201ENST00000364588 IGFBP4P22692 258 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 TXLNAP40222 546 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 MAP2K3P46734 347 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 MLECQ14165 292 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 ELOAQ14241 798 aaKnown RBP8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 PBXIP1Q96AQ6 731 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 LMTK3Q96Q04 1460 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 ARHGAP35Q9NRY4 1499 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 MYO5CQ9NQX4 1742 aa8.48□□□□□ -1.05
RNU4-4P-201ENST00000364588 KIF14Q15058 1648 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 PLCH2O75038 1416 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 FMN1Q68DA7 1419 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 HIF1AQ16665 826 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 SVOPQ8N4V2 548 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
RNU4-4P-201ENST00000364588 POGZQ7Z3K3 1410 aa8.46□□□□□ -1.05
RNU4-4P-201ENST00000364588 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.05
RNU4-4P-201ENST00000364588 FER1L4A9Z1Z3 1794 aa8.46□□□□□ -1.05
RNU4-4P-201ENST00000364588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 C21orf2O43822 256 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 FGFR3P22607 806 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 HSPA2P54652 639 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 ABHD17AQ96GS6 310 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.06
RNU4-4P-201ENST00000364588 MAGI2Q86UL8 1455 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 FOXO3O43524 673 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 ATG7O95352 703 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 FBXO41Q8TF61 875 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 C2orf49Q9BVC5 232 aaPredicted RBP8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 ACIN1Q9UKV3 1341 aaKnown RBP8.45□□□□□ -1.06
RNU4-4P-201ENST00000364588 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 BNIP3LO60238 219 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 BMP4P12644 408 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 EFCAB2Q5VUJ9 269 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 ZNF385CQ66K41 422 aaPredicted RBP8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 TROQ12816 1431 aaPredicted RBP8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 ARHGAP5Q13017 1502 aa8.44□□□□□ -1.06
RNU4-4P-201ENST00000364588 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
RNU4-4P-201ENST00000364588 LRRC4BQ9NT99 713 aa8.43□□□□□ -1.06
RNU4-4P-201ENST00000364588 ZMIZ1Q9ULJ6 1067 aa8.43□□□□□ -1.06
RNU4-4P-201ENST00000364588 ATP10AO60312 1499 aa8.43□□□□□ -1.06
RNU4-4P-201ENST00000364588 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms