RNA–Protein interactions for RNA: ENST00000362443.1

RNU4-82P-201, Transcript of RNA, U4 small nuclear 82, pseudogene, humanhuman

BASIC

Gene RNU4-82P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-82P-201ENST00000362443 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 LTBP3Q9NS15 1303 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 KDRP35968 1356 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 USP31Q70CQ4 1352 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 CARMIL3Q8ND23 1372 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 MYH14Q7Z406 1995 aaKnown RBP3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 BDP1A6H8Y1 2624 aa3.85□□□□□ -1.79
RNU4-82P-201ENST00000362443 AFDNP55196 1824 aaKnown RBP3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 H0YGN5 161 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 CELF2O95319 508 aaKnown RBP3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 NOGQ13253 232 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 AKAP4Q5JQC9 854 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 RC3H1Q5TC82 1133 aaKnown RBP3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 NBPF6Q5VWK0 638 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 NME9Q86XW9 330 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 SYNE4Q8N205 404 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 Q8N3U1 123 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 NBPF4Q96M43 638 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 RBM27Q9P2N5 1060 aaKnown RBP3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 KDM2AQ9Y2K7 1162 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 PCDH11XQ9BZA7 1347 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 PCDH11YQ9BZA8 1340 aa3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.79
RNU4-82P-201ENST00000362443 CD163L1Q9NR16 1453 aa3.84□□□□□ -1.8
RNU4-82P-201ENST00000362443 COL5A3P25940 1745 aaPredicted RBP3.84□□□□□ -1.8
RNU4-82P-201ENST00000362443 NRXN2Q9P2S2 1712 aa3.84□□□□□ -1.8
RNU4-82P-201ENST00000362443 FAM155AB1AL88 458 aaPredicted RBP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 H0YIN7 160 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 SOX1O00570 391 aaPredicted RBP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 PLA2G5P39877 138 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 GSK3AP49840 483 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 KIF23Q02241 960 aaPredicted RBP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 PKN2Q16513 984 aaKnown RBP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 BICDL1Q6ZP65 573 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 ATG3Q9NT62 314 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 CGNL1Q0VF96 1302 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 CNTNAP4Q9C0A0 1308 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 SMG6Q86US8 1419 aaKnown RBP3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 PAPPA2Q9BXP8 1791 aa3.83□□□□□ -1.8
RNU4-82P-201ENST00000362443 SLX4Q8IY92 1834 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 COL11A2P13942 1736 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 MON2Q7Z3U7 1717 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 KTN1Q86UP2 1357 aaKnown RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 ERBB4Q15303 1308 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 MAP3K19Q56UN5 1328 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 LOC105371045A0A1W2PR82 267 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 RIMBP2O15034 1052 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 TATP17735 454 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 EN2P19622 333 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 HOXC9P31274 260 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 EPS15P42566 896 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 NFIXQ14938 502 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 FBXO46Q6PJ61 603 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 CCDC24Q8N4L8 307 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 ZNF296Q8WUU4 475 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 RAPGEF4Q8WZA2 1011 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 ZNF622Q969S3 477 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 LRCH3Q96II8 777 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 MPHOSPH9Q99550 1183 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 GLIS2Q9BZE0 524 aaPredicted RBP3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 TMOD3Q9NYL9 352 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 AKAP11Q9UKA4 1901 aa3.82□□□□□ -1.8
RNU4-82P-201ENST00000362443 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 ANKRD31Q8N7Z5 1873 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 LAMB4A4D0S4 1761 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 CENPJQ9HC77 1338 aaPredicted RBP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 FZD9O00144 591 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 SERPINB2P05120 415 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 FBLN1P23142 703 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 CRKLP46109 303 aaKnown RBP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 SCNN1DP51172 638 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 HUNKP57058 714 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 NKX1-1Q15270 411 aaPredicted RBP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 USPL1Q5W0Q7 1092 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 GPC2Q8N158 579 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 DCAF11Q8TEB1 546 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 CSRNP1Q96S65 589 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 PRO3102Q9H379 93 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 ZNF408Q9H9D4 720 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 ZNF277Q9NRM2 450 aaPredicted RBP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 HDAC9Q9UKV0 1011 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 RBBP6Q7Z6E9 1792 aaKnown RBP3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
RNU4-82P-201ENST00000362443 SBNO2Q9Y2G9 1366 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 PBX2P40425 430 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 PRPF40BQ6NWY9 871 aaKnown RBP3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 OLFM4Q6UX06 510 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 DLK2Q6UY11 383 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 USP50Q70EL3 339 aaPredicted RBP3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 C7orf43Q8WVR3 580 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 FAM122AQ96E09 287 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 SNX27Q96L92 541 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 TMEM106CQ9BVX2 250 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 BCL2L12Q9HB09 334 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 STXBP5LQ9Y2K9 1186 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 GJA3Q9Y6H8 435 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 COL4A5P29400 1685 aa3.8□□□□□ -1.8
RNU4-82P-201ENST00000362443 BCORQ6W2J9 1755 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms